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PROSITE entry PS51176


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51176
Entry name [info] PDH_ADH
Accession [info] PS51176
Entry type [info] MATRIX
Date [info] 01-DEC-2005 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51176
Associated ProRule [info] PRU00522

Name and characterization of the entry

Description [info] Prephenate/arogenate dehydrogenase domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=285;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=280;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2040403; R2=0.0145464; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=26824.0000000; R2=0.0000000; PRIORITY=1; TEXT='Heuristic 0.1%';
/CUT_OFF: LEVEL=0; SCORE=750; H_SCORE=26824; N_SCORE=13.1; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=296; H_SCORE=26824; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 31 in 30 different sequences
Number of true positive hits 31 in 30 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] PS_Langendijk_Genevaux
Feature key [info] DOMAIN
Feature description [info] Prephenate/arogenate dehydrogenase
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
30 sequences

CMLC_STRVP  (F2RB78), NOVF_STRNV  (Q9L9G2), PAPC_STRPR  (P72540), 
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PDB
[Detailed view]
1 PDB

2PV7