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PROSITE entry PS51159


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PURL: https://purl.expasy.org/prosite/signature/PS51159

Direct ScanProsite submission
General information about the entry

Entry name [info] CBM21
Accession [info] PS51159
Entry type [info] MATRIX
Date [info] 01-NOV-2005 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51159
Associated ProRule [info] PRU00491

Name and characterization of the entry

Description [info] CBM21 (carbohydrate binding type-21) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=108;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=103;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.1166666; R2=0.0140422; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=7075.8237305; R2=5.2720590; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=761; H_SCORE=11088; N_SCORE=12.8; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=313; H_SCORE=8726; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-20; I=-20; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 35 in 35 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] PS_Langendijk_Genevaux
Feature key [info] DOMAIN
Feature description [info] CBM21
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
35 sequences

AMY1_LIPKO  (Q01117), AMYG_BLAAD  (P42042), AMYG_RHIOR  (P07683), 
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PDB
[Detailed view]
6 PDB

2DJM; 2EEF; 2M83; 7QF7; 7QFA; 7QM2