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PROSITE entry PS51154


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51154
Entry name [info] MACRO
Accession [info] PS51154
Entry type [info] MATRIX
Date [info] 01-OCT-2005 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51154
Associated ProRule [info] PRU00490

Name and characterization of the entry

Description [info] Macro domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=183;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=178;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.6459429; R2=0.0154919; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=6967.3828125; R2=6.5531917; PRIORITY=1; TEXT='Heuristic 0.1%';
/CUT_OFF: LEVEL=0; SCORE=378; H_SCORE=9444; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=249; H_SCORE=8599; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-20; I=-20; B1=-300; E1=-300; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 253 in 246 different sequences
Number of true positive hits 253 in 246 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.22 %

Comments [info]

Taxonomic range [info] Archaea, Bacteriophages, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 3
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] PS_Langendijk_Genevaux
Feature key [info] DOMAIN
Feature description [info] Macro
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
246 sequences

ADPRH_STAAC (Q5HIW9), ADPRH_STAAM (P67343), ADPRH_STAAN (P67344), 
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UniProtKB/Swiss-Prot
False negative sequences
2 sequences

POA1_ASPCL  (A1CNH7), POA1_CHAGB  (Q2GV19)

		
PDB
[Detailed view]
824 PDB

1HJZ; 1NJR; 1SPV; 1TXZ; 1TY8; 1VHU; 1YD9; 1ZR3; 1ZR5; 2ACF; 2BFQ; 2BFR;
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