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PROSITE entry PS51117


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51117
Entry name [info] LAMININ_NTER
Accession [info] PS51117
Entry type [info] MATRIX
Date [info] 01-APR-2005 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51117
Associated ProRule [info] PRU00466

Name and characterization of the entry

Description [info] Laminin N-terminal domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=249;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=244;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2989388; R2=0.0110893; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=560; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=379; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 52 in 52 different sequences
Number of true positive hits 52 in 52 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Feature key [info] DOMAIN
Feature description [info] Laminin N-terminal
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
52 sequences

EPI1_CAEEL  (Q21313), LAM2_CAEEL  (Q18823), LAM3_CAEEL  (G5ECE3), 
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PDB
[Detailed view]
24 PDB

2Y38; 3TBD; 3ZYG; 3ZYI; 3ZYJ; 4AQS; 4AQT; 4OVE; 4PLM; 4PLN; 4PLO; 4URT;
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