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PROSITE entry PS51105


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PURL: https://purl.expasy.org/prosite/signature/PS51105

Direct ScanProsite submission
General information about the entry

Entry name [info] PTS_EIIC_TYPE_3
Accession [info] PS51105
Entry type [info] MATRIX
Date [info] 01-APR-2005 CREATED;
26-FEB-2020 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51103
Associated ProRule [info] PRU00428

Name and characterization of the entry

Description [info] PTS_EIIC type-3 domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=407;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=402;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.6481862; R2=0.0076361; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=97825.0000000; R2=0.0000000; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=2273; H_SCORE=97825; N_SCORE=20.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=505; H_SCORE=97825; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-9; D=-20; I=-20; B1=*; E1=*; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 20 in 20 different sequences
Number of true positive hits 20 in 20 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] V_Lesaux
Feature key [info] DOMAIN
Feature description [info] PTS EIIC type-3
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
20 sequences

CELB_LACLA  (Q9CJ32), GPIIC_LACLM (A2RJV0), PTEC_BACSU  (O05507), 
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