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PROSITE entry PS51103


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51103
Entry name [info] PTS_EIIC_TYPE_1
Accession [info] PS51103
Entry type [info] MATRIX
Date [info] 01-APR-2005 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51103
Associated ProRule [info] PRU00426

Name and characterization of the entry

Description [info] PTS_EIIC type-1 domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=369;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=364;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.0406361; R2=0.0162661; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=38367.0000000; R2=0.0000000; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=705; H_SCORE=38367; N_SCORE=14.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=213; H_SCORE=38367; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-9; D=-50; I=-50; B1=-1000; E1=-1000; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 103 in 103 different sequences
Number of true positive hits 103 in 103 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] V_Lesaux
Feature key [info] DOMAIN
Feature description [info] PTS EIIC type-1
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
103 sequences

PTG3B_CORGT (Q45298), PTG3C_BACSU (P20166), PTG3C_MYCGE (P47315), 
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PTG3C_GEOSE (P42015)

		
PDB
[Detailed view]
2 PDB

8QSR; 8QST