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PROSITE entry PS51101


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51101
Entry name [info] PTS_EIIB_TYPE_4
Accession [info] PS51101
Entry type [info] MATRIX
Date [info] 01-APR-2005 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00795
Associated ProRule [info] PRU00424

Name and characterization of the entry

Description [info] PTS_EIIB type-4 domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=166;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=161;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.0512714; R2=0.0125248; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=24594.0000000; R2=0.0000000; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=795; H_SCORE=24594; N_SCORE=12.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=356; H_SCORE=24594; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-50; I=-50; B1=-1000; E1=-1000; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 11 in 11 different sequences
Number of true positive hits 11 in 11 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] V_Lesaux
Feature key [info] DOMAIN
Feature description [info] PTS EIIB type-4
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
11 sequences

PTFB_BACSU  (P26380), PTNAB_ECO57 (P69799), PTNAB_ECOL6 (P69798), 
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PDB
[Detailed view]
6 PDB

1BLE; 1NRZ; 1VSQ; 2JZH; 2JZN; 2JZO