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PROSITE entry PS51093


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51093
Entry name [info] PTS_EIIA_TYPE_1
Accession [info] PS51093
Entry type [info] MATRIX
Date [info] 01-APR-2005 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00528
Associated ProRule [info] PRU00416

Name and characterization of the entry

Description [info] PTS_EIIA type-1 domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=105;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=100;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.1778064; R2=0.0100925; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=7146.1279297; R2=10.0888004; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=875; H_SCORE=15974; N_SCORE=10.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=528; H_SCORE=12473; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-9; D=-50; I=-50; B1=-1000; E1=-1000; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 82 in 82 different sequences
Number of true positive hits 82 in 82 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] V_Lesaux
Feature key [info] DOMAIN
Feature description [info] PTS EIIA type-1
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
82 sequences

LACY_LACDA  (P22733), LACY_LACHE  (Q7WTB2), LACY_LEULA  (Q48624), 
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PDB
[Detailed view]
15 PDB

1AX3; 1F3G; 1F3Z; 1GGR; 1GLA; 1GLB; 1GLC; 1GLD; 1GLE; 1GPR; 1O2F; 2F3G;
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