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PROSITE entry PS50927


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS50927
Entry name [info] BULB_LECTIN
Accession [info] PS50927
Entry type [info] MATRIX
Date [info] 01-SEP-2003 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50927
Associated ProRule [info] PRU00038

Name and characterization of the entry

Description [info] Bulb-type lectin domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=115;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=110;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.0290728; R2=0.0127875; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=6581.7900391; R2=4.7899160; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=389; H_SCORE=8445; N_SCORE=8.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=272; H_SCORE=7885; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 91 in 82 different sequences
Number of true positive hits 91 in 82 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] Bulb-type lectin
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
82 sequences

ASAL_ALLSA  (P83886), B120_ARATH  (O81906), CE101_ARATH (Q9LW83), 
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PDB
[Detailed view]
14 PDB

1JPC; 1MSA; 1NIV; 1NPL; 2D04; 2DPF; 3DZW; 3MEZ; 3R0E; 5D5G; 5D9Z; 5J76;
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