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PROSITE entry PS50923


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PURL: https://purl.expasy.org/prosite/signature/PS50923

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General information about the entry

Entry name [info] SUSHI
Accession [info] PS50923
Entry type [info] MATRIX
Date [info] 01-DEC-2003 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50923
Associated ProRule [info] PRU00302

Name and characterization of the entry

Description [info] Sushi/CCP/SCR domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=61;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=61;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2641132; R2=0.0103577; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=477; N_SCORE=7.2; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=313; N_SCORE=5.5; MODE=1; TEXT='R?';
/DEFAULT: M0=-9; D=-50; I=-50; B1=-200; E1=-200; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 1'057 in 247 different sequences
Number of true positive hits 1'057 in 247 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.16 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 35
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Feature key [info] DOMAIN
Feature description [info] Sushi
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
247 sequences

APOH_BOVIN  (P17690), APOH_CANLF  (P33703), APOH_HUMAN  (P02749), 
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UniProtKB/Swiss-Prot
False negative sequences
9 sequences

C1RL_HUMAN  (Q9NZP8), C1RL_MOUSE  (Q3UZ09), C1RL_RAT(Q6IE64), 
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PDB
[Detailed view]
229 PDB

1C1Z; 1CKL; 1E5G; 1ELV; 1G4F; 1G4G; 1GHQ; 1GKG; 1GKN; 1GPZ; 1H03; 1H04;
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