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PROSITE entry PS50897


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS50897
Entry name [info] CTLH
Accession [info] PS50897
Entry type [info] MATRIX
Date [info] 01-FEB-2003 CREATED;
13-FEB-2019 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50896
Associated ProRule [info] PRU00058

Name and characterization of the entry

Description [info] C-terminal to LisH (CTLH) motif profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=60;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=60;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=6.0986176; R2=0.0001178; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=316280.9062500; R2=0.7006981; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=16141; H_SCORE=327591; N_SCORE=8.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=3408; H_SCORE=318669; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: B0=*; B1=*; E0=*; E1=*; MM=*; II=*;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 96 in 96 different sequences
Number of true positive hits 96 in 96 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.96 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] CTLH
Version [info] 6

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
96 sequences

D9043_DICDI (P0DPA1), FYV10_ASPCL (A1C9R2), FYV10_ASPFU (Q4WTQ4), 
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UniProtKB/Swiss-Prot
False negative sequences
2 sequences

FYV10_CANAL (Q5A4G9), SMU1_DICDI  (Q54Y96)

		
PDB
[Detailed view]
36 PDB

4ZHE; 5C6Q; 5C6V; 5C7E; 5C7F; 5EN6; 5EN7; 5EN8; 5J9K; 5JA5; 5JGC; 5JHP;
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