PROSITE entry PS50868
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PURL: https://purl.expasy.org/prosite/signature/PS50868
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General information about the entry
| Entry name [info] | POST_SET |
| Accession [info] | PS50868 |
| Entry type [info] | MATRIX |
| Date [info] |
01-NOV-2002 CREATED;
07-APR-2021 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC50280 |
| Associated ProRule [info] | PRU00155 |
Name and characterization of the entry
| Description [info] | Post-SET domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=17; /DISJOINT: DEFINITION=PROTECT; N1=2; N2=16; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.1220000; R2=0.0163836; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=164.0236969; R2=0.1421801; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=359; H_SCORE=215; N_SCORE=8.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=268; H_SCORE=202; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-11; D=-20; I=-20; B0=-60; B1=-60; E0=-60; E1=-60; MI=-105; MD=-105; IM=-105; DM=-105; ...» more |
Numerical results [info]
| Total number of hits | 127 in 127 different sequences |
| Number of true positive hits | 127 in 127 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 10 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 92.70 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | window20_shuffled |
| Author [info] | N_Hulo |
| Feature key [info] | DOMAIN |
| Feature description [info] | Post-SET |
| Version [info] | 6 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
127 sequences
ASH1L_HUMAN (Q9NR48), ASH1L_MOUSE (Q99MY8), ASH1_DROME (Q9VW15),» more
|
| UniProtKB/Swiss-Prot False negative sequences |
10 sequences
ATXR3_ARATH (O23372), EHMT2_HUMAN (Q96KQ7), EHMT2_MOUSE (Q9Z148),» more |
| PDB [Detailed view] |
129 PDB
1ML9; 1MVH; 1MVX; 1PEG; 2O8J; 2R3A; 2W5Y; 2W5Z; 3BO5; 3K5K; 3OOI; 3OPE; » more |