PROSITE logo

PROSITE entry PS50832


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS50832

Direct ScanProsite submission
General information about the entry

Entry name [info] S1_IF1_TYPE
Accession [info] PS50832
Entry type [info] MATRIX
Date [info] 01-DEC-2001 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50126
Associated ProRule [info] PRU00181

Name and characterization of the entry

Description [info] S1 domain IF1 type profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=75;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=70;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.4595000; R2=0.0156999; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=4883.4868164; R2=4.5803108; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=513; H_SCORE=7233; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=385; H_SCORE=6647; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-9; D=-20; I=-20; B1=-60; E1=-60; MI=-105; MD=-105; IM=-105; DM=-105;
...
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 704 in 704 different sequences
Number of true positive hits 704 in 704 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.58 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Feature key [info] DOMAIN
Feature description [info] S1-like
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
704 sequences

EIF1A_BOVIN (Q58CY2), EIF1A_CAEEL (Q23646), EIF1A_CHICK (Q6K1L7), 
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

EIF1A_CAEBR (P0C659), EIF1A_DROME (Q8IQ13), EIF1A_DROPS (Q29MZ0)

		
PDB
[Detailed view]
84 PDB

1AH9; 1D7Q; 1HR0; 1JT8; 1ZO1; 2DGY; 2N3S; 2N78; 2N8N; 3I4O; 3J80; 3J81;
» more