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PROSITE entry PS50821


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PURL: https://purl.expasy.org/prosite/signature/PS50821

Direct ScanProsite submission
General information about the entry

Entry name [info] PAZ
Accession [info] PS50821
Entry type [info] MATRIX
Date [info] 01-MAY-2002 CREATED;
03-MAY-2023 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50821
Associated ProRule [info] PRU00142

Name and characterization of the entry

Description [info] PAZ domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=113;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=108;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.0376272; R2=0.0085103; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=1054; N_SCORE=11.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=525; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-25; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 119 in 119 different sequences
Number of true positive hits 119 in 119 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] PAZ
Version [info] 6

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
119 sequences

AGO10_ARATH (Q9XGW1), AGO11_ORYSJ (Q10F39), AGO12_ORYSJ (Q7Y001), 
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PDB
[Detailed view]
144 PDB

1R6Z; 1SI2; 1SI3; 1T2R; 1T2S; 1U04; 1VYN; 1YVU; 1Z25; 1Z26; 2F8S; 2F8T;
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