PROSITE logo

PROSITE entry PS50801


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS50801
Entry name [info] STAS
Accession [info] PS50801
Entry type [info] MATRIX
Date [info] 01-APR-2002 CREATED;
13-FEB-2019 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50801
Associated ProRule [info] PRU00198

Name and characterization of the entry

Description [info] STAS domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=114;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=109;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.8714000; R2=0.0266017; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=3552.5153809; R2=4.3711338; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=253; H_SCORE=4658; N_SCORE=8.6; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=174; H_SCORE=4313; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-20; I=-20; B1=-60; E1=-60; MI=-105; MD=-105; IM=-105; DM=-105;
...
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 126 in 126 different sequences
Number of true positive hits 126 in 126 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] STAS
Version [info] 6

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
126 sequences

BICA_PICP2  (Q14SY0), BICA_SYNY3  (Q55415), BTRV_BORBR  (Q7WLU9), 
» more

PDB
[Detailed view]
74 PDB

1AUZ; 1BUZ; 1H4X; 1H4Y; 1H4Z; 1SBO; 1T6R; 1TH8; 1THN; 1TID; 1TIL; 1VC1;
» more