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PROSITE entry PS50404


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PURL: https://purl.expasy.org/prosite/signature/PS50404

Direct ScanProsite submission
General information about the entry

Entry name [info] GST_NTER
Accession [info] PS50404
Entry type [info] MATRIX
Date [info] 01-DEC-2007 CREATED;
07-APR-2021 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50404
Associated ProRule [info] PRU00684

Name and characterization of the entry

Description [info] Soluble glutathione S-transferase N-terminal domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=80;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=76;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2971745; R2=0.0075862; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=11780.4814453; R2=0.9962074; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=910; H_SCORE=12687; N_SCORE=9.2; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=555; H_SCORE=12333; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-25; D=-40; I=-40; B1=-500; E1=-500; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Post-processing [info]

PROMOTED_BY PS50405
COMPETES_HIT_WITH PS51352; PS51353; PS51354; PS51355

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 401 in 401 different sequences
Number of true positive hits 400 in 400 different sequences
Number of 'unknown' hits 1
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.75 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Version [info] 6

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
400 sequences

ACLG_ASPOR  (Q2UPB2), ATIMG_ASPTN (Q0CS62), CLIC3_HUMAN (O95833), 
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

PGES2_DANRE (Q7ZUC7)

		
UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

GST2_ASCSU  (P48429)

		
UniProtKB/Swiss-Prot
'Unknown' sequences
1 sequence

GTO2_SCHPO  (O94524)

		
PDB
[Detailed view]
440 PDB

10GS; 11GS; 12GS; 13GS; 14GS; 16GS; 17GS; 18GS; 19GS; 1A0F; 1AGS; 1AQV;
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