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PROSITE entry PS50271


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PURL: https://purl.expasy.org/prosite/signature/PS50271

Direct ScanProsite submission
General information about the entry

Entry name [info] ZF_UBP
Accession [info] PS50271
Entry type [info] MATRIX
Date [info] 01-OCT-2005 CREATED;
29-SEP-2021 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50271
Associated ProRule [info] PRU00502

Name and characterization of the entry

Description [info] Zinc finger UBP-type profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=102;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=97;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.0758047; R2=0.0093042; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=960; N_SCORE=11.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=476; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-28; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 82 in 81 different sequences
Number of true positive hits 82 in 81 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] ZN_FING
Feature description [info] UBP-type
Version [info] 7

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
81 sequences

BRAP2_CAEEL (Q95QN6), BRAP_HUMAN  (Q7Z569), BRAP_MOUSE  (Q99MP8), 
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PDB
[Detailed view]
67 PDB

2G43; 2G45; 2I50; 2L80; 2UZG; 3C5K; 3GV4; 3IHP; 3JCR; 3M99; 3MHH; 3MHS;
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