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PROSITE entry PS50237


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PURL: https://purl.expasy.org/prosite/signature/PS50237

Direct ScanProsite submission
General information about the entry

Entry name [info] HECT
Accession [info] PS50237
Entry type [info] MATRIX
Date [info] 01-DEC-2001 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50237
Associated ProRule [info] PRU00104

Name and characterization of the entry

Description [info] HECT domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=336; TOPOLOGY=LINEAR;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=331;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=.0677; R2=.01550073; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=544; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=415; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: B1=-50; E1=-50; MI=-105; MD=-105; IM=-105; DM=-105; I=-20; D=-20;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 117 in 117 different sequences
Number of true positive hits 117 in 117 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.15 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] K_Hofmann
Feature key [info] DOMAIN
Feature description [info] HECT
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
117 sequences

ALTH1_PLAF7 (C6KTB7), AREL1_HUMAN (O15033), AREL1_MOUSE (Q8CHG5), 
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UniProtKB/Swiss-Prot
False negative sequences
1 sequence

G2E3_CHICK  (Q5F4A1)

		
PDB
[Detailed view]
85 PDB

1C4Z; 1D5F; 1ND7; 1ZVD; 2ONI; 2XBB; 2XBF; 3G1N; 3H1D; 3JVZ; 3JW0; 3OLM;
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