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PROSITE entry PS50227


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS50227
Entry name [info] G_PROTEIN_RECEP_F2_3
Accession [info] PS50227
Entry type [info] MATRIX
Date [info] 01-DEC-2001 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00559

Name and characterization of the entry

Description [info] G-protein coupled receptors family 2 profile 1.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=81;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=76;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.0635000; R2=0.0130527; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=5404.4687500; R2=5.0736432; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=570; H_SCORE=8296; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=417; H_SCORE=7520; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: D=-20; I=-20; B1=-50; E1=-50; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 119 in 119 different sequences
Number of true positive hits 119 in 119 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 17
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.50 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] K_Hofmann
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
119 sequences

AGRA2_DANRE (E7FBY6), AGRA2_HUMAN (Q96PE1), AGRA2_MOUSE (Q91ZV8), 
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UniProtKB/Swiss-Prot
False negative sequences
17 sequences

AGRF2_HUMAN (Q8IZF7), AGRF2_MOUSE (E9Q4J9), AGRF2_RAT   (D4A3T6), 
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PDB
[Detailed view]
197 PDB

1U34; 2JNC; 2JND; 2JOD; 2L27; 2QKH; 2X57; 2XDG; 3AQF; 3C4M; 3C59; 3C5T;
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