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PROSITE entry PS50213


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PURL: https://purl.expasy.org/prosite/signature/PS50213

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General information about the entry

Entry name [info] FAS1
Accession [info] PS50213
Entry type [info] MATRIX
Date [info] 01-APR-2003 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50213
Associated ProRule [info] PRU00082

Name and characterization of the entry

Description [info] FAS1/BIgH3 domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=130;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=125;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.1190171; R2=0.0229535; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=265; N_SCORE=8.2000; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=191; N_SCORE=6.5000; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-20; I=-20; B1=-200; E1=-200; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 134 in 64 different sequences
Number of true positive hits 134 in 64 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.10 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 7
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Feature key [info] DOMAIN
Feature description [info] FAS1
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
64 sequences

096L_IIV6   (O55719), AURS_GIBZE  (I1RF63), BGH3_BOVIN  (P55906), 
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UniProtKB/Swiss-Prot
False negative sequences
4 sequences

081L_IIV3   (Q196X9), FLA21_ARATH (Q9FL53), YFAS1_CANAL (Q5AI48), 
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PDB
[Detailed view]
16 PDB

1NYO; 1O70; 1X3B; 2LTB; 2LTC; 2VXP; 5N86; 5NV6; 5WT7; 5YJG; 5YJH; 7AS7;
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