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PROSITE entry PS50065


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PURL: https://purl.expasy.org/prosite/signature/PS50065

Direct ScanProsite submission
General information about the entry

Entry name [info] HMG_COA_REDUCTASE_4
Accession [info] PS50065
Entry type [info] MATRIX
Date [info] 01-NOV-1997 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00064

Name and characterization of the entry

Description [info] Hydroxymethylglutaryl-coenzyme A reductases family profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=405;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=400;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=-.7203; R2=.01004801; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=918; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=719; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: D=-20; I=-20; B1=0; E1=0; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 69 in 69 different sequences
Number of true positive hits 69 in 69 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] K_Hofmann
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
69 sequences

HMDH1_ARATH (P14891), HMDH1_ASPFU (Q4WHZ1), HMDH1_DICDI (P34135), 
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PDB
[Detailed view]
40 PDB

1DQ8; 1DQ9; 1DQA; 1HW8; 1HW9; 1HWI; 1HWJ; 1HWK; 1HWL; 1QAX; 1QAY; 1R31;
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