PROSITE logo

PROSITE entry PS01359


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS01359
Entry name [info] ZF_PHD_1
Accession [info] PS01359
Entry type [info] PATTERN
Date [info] 01-APR-2002 CREATED;
01-JAN-2003 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50016

Name and characterization of the entry

Description [info] Zinc finger PHD-type signature.
Pattern [info] 
C-x(1,2)-C-x(5,45)-[VMFLWIE]-x-C-x(1,4)-C-x(1,4)-[WYFVQHLT]-H-x(2)-C-
x(5,45)-[WFLYI]-x-C-x(2)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 485 in 398 different sequences
Number of true positive hits 474 in 387 different sequences
Number of 'unknown' hits 0
Number of false positive hits 11 in 11 different sequences
Number of false negative sequences 90
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.73 %
Recall (true positives / (true positives + false negatives)) 84.04 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 387 sequences 

AF10_HUMAN  (P55197), AF10_MOUSE  (O54826), AF17_HUMAN  (P55198),
» more

UniProtKB/Swiss-Prot
False negative sequences		 90 sequences 

AIPP2_ARATH (F4IYH6), ARID4_ARATH (Q6NQ79), ASH2L_HUMAN (Q9UBL3),
» more

UniProtKB/Swiss-Prot
False positive sequences		 11 sequences 

ASR1_YEAST  (Q06834), FAP1H_SCHPO (O74853), MBDR2_DROME (Q9VGA4),
» more

PDB
[Detailed view]		 291 PDB

1F62; 1FP0; 1MM2; 1MM3; 1WE9; 1WEE; 1WEM; 1WEN; 1WEP; 1WES; 1WEU; 1WEV;
» more