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PROSITE entry PS01359


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PURL: https://purl.expasy.org/prosite/signature/PS01359

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General information about the entry

Entry name [info] ZF_PHD_1
Accession [info] PS01359
Entry type [info] PATTERN
Date [info] 01-APR-2002 CREATED;
01-JAN-2003 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50016

Name and characterization of the entry

Description [info] Zinc finger PHD-type signature.
Pattern [info] 
C-x(1,2)-C-x(5,45)-[VMFLWIE]-x-C-x(1,4)-C-x(1,4)-[WYFVQHLT]-H-x(2)-C-
x(5,45)-[WFLYI]-x-C-x(2)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 485 in 398 different sequences
Number of true positive hits 474 in 387 different sequences
Number of 'unknown' hits 0
Number of false positive hits 11 in 11 different sequences
Number of false negative sequences 90
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.73 %
Recall (true positives / (true positives + false negatives)) 84.04 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 387 sequences 

AF10_HUMAN  (P55197), AF10_MOUSE  (O54826), AF17_HUMAN  (P55198),
» more

UniProtKB/Swiss-Prot
False negative sequences		 90 sequences 

AIPP2_ARATH (F4IYH6), ARID4_ARATH (Q6NQ79), ASH2L_HUMAN (Q9UBL3),
» more

UniProtKB/Swiss-Prot
False positive sequences		 11 sequences 

ASR1_YEAST  (Q06834), FAP1H_SCHPO (O74853), MBDR2_DROME (Q9VGA4),
» more

PDB
[Detailed view]		 291 PDB

1F62; 1FP0; 1MM2; 1MM3; 1WE9; 1WEE; 1WEM; 1WEN; 1WEP; 1WES; 1WEU; 1WEV;
» more