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PROSITE entry PS01350


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PURL: https://purl.expasy.org/prosite/signature/PS01350

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General information about the entry

Entry name [info] ISPF
Accession [info] PS01350
Entry type [info] PATTERN
Date [info] 01-DEC-2001 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC01048

Name and characterization of the entry

Description [info] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature.
Pattern [info]
S-[DN]-[GA]-D-[LIVAP]-[LIVAG]-x-H-[STAC]-x(2)-[DNT]-[SAG]-x(2)-[SGA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 518 in 518 different sequences
Number of true positive hits 518 in 518 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.29 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
518 sequences

ISPDF_AGRFC (Q8UFF4), ISPDF_ALBFT (Q21YT7), ISPDF_ALIB4 (A8ER37), 
» more

UniProtKB/Swiss-Prot
False negative sequences
9 sequences

ISPDF_ANADE (Q2IQG8), ISPDF_ANADF (A7HDA2), ISPDF_RHORT (Q2RTS1), 
» more

PDB
[Detailed view]
68 PDB

1GX1; 1H47; 1H48; 1IV1; 1IV2; 1IV3; 1IV4; 1JN1; 1JY8; 1KNJ; 1KNK; 1T0A;
» more