PROSITE logo

PROSITE entry PS01350


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS01350
Entry name [info] ISPF
Accession [info] PS01350
Entry type [info] PATTERN
Date [info] 01-DEC-2001 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC01048

Name and characterization of the entry

Description [info] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature.
Pattern [info]
S-[DN]-[GA]-D-[LIVAP]-[LIVAG]-x-H-[STAC]-x(2)-[DNT]-[SAG]-x(2)-[SGA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 518 in 518 different sequences
Number of true positive hits 518 in 518 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.29 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
518 sequences

ISPDF_AGRFC (Q8UFF4), ISPDF_ALBFT (Q21YT7), ISPDF_ALIB4 (A8ER37), 
» more

UniProtKB/Swiss-Prot
False negative sequences
9 sequences

ISPDF_ANADE (Q2IQG8), ISPDF_ANADF (A7HDA2), ISPDF_RHORT (Q2RTS1), 
» more

PDB
[Detailed view]
68 PDB

1GX1; 1H47; 1H48; 1IV1; 1IV2; 1IV3; 1IV4; 1JN1; 1JY8; 1KNJ; 1KNK; 1T0A;
» more