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PROSITE entry PS01295


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS01295
Entry name [info] ISPD
Accession [info] PS01295
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2001 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00997

Name and characterization of the entry

Description [info] 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature.
Pattern [info] 
[IVT]-[LIVMC]-[IVT]-[HS]-D-[SGAV]-[AV]-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 455 in 455 different sequences
Number of true positive hits 448 in 448 different sequences
Number of 'unknown' hits 0
Number of false positive hits 7 in 7 different sequences
Number of false negative sequences 57
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.46 %
Recall (true positives / (true positives + false negatives)) 88.71 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 448 sequences 

F6PCT_CAMJU (A0A0Q3NN41), ISPDF_AGRFC (Q8UFF4), ISPDF_ALBFT (Q21YT7),
» more

UniProtKB/Swiss-Prot
False negative sequences		 57 sequences 

ACS1_HAEIF  (Q48154), BCS1_HAEIF  (Q48230), ISPDF_ALIB4 (A8ER37),
» more

UniProtKB/Swiss-Prot
False positive sequences		 7 sequences 

GPI14_GIBZE (Q4I073), MYBP_DICDI  (Q55DP9), NUD13_MOUSE (Q8JZU0),
» more

PDB
[Detailed view]		 48 PDB

1H3M; 1I52; 1INI; 1INJ; 1VGT; 1VGU; 1VGW; 1VGZ; 1VPA; 1W55; 1W57; 1W77;
» more