PROSITE entry PS01287
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PURL: https://purl.expasy.org/prosite/signature/PS01287
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General information about the entry
Entry name [info] | RTC |
Accession [info] | PS01287 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1997 CREATED;
01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00989 |
Name and characterization of the entry
Description [info] | RNA 3'-terminal phosphate cyclase signature. |
Pattern [info] |
[RH]-G-x(2)-P-x-G(3)-x-[LIV]. |
Numerical results [info]
Total number of hits | 85 in 85 different sequences |
Number of true positive hits | 83 in 83 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 2 in 2 different sequences |
Number of false negative sequences | 16 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 97.65 % |
Recall (true positives / (true positives + false negatives)) | 83.84 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
83 sequences
RCL1_ARATH (Q9C578), RCL1_BOVIN (Q2KHX8), RCL1_CAEEL (Q23400),» more
|
UniProtKB/Swiss-Prot False negative sequences |
16 sequences
RTCA_GLOC7 (B7KCF3), RTCA_HALS3 (B0R414), RTCA_HALSA (Q9HRE8),» more |
UniProtKB/Swiss-Prot False positive sequences |
2 sequences
BCL7C_HUMAN (Q8WUZ0), BCL7C_MOUSE (O08664) |
PDB [Detailed view] |
40 PDB
1QMH; 1QMI; 3KGD; 3TUT; 3TUX; 3TV1; 3TW3; 4CLQ; 4O89; 4O8J; 5JPQ; 5TZS; » more |