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PROSITE entry PS01287


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PURL: https://purl.expasy.org/prosite/signature/PS01287

Direct ScanProsite submission
General information about the entry

Entry name [info] RTC
Accession [info] PS01287
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-NOV-1997 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00989

Name and characterization of the entry

Description [info] RNA 3'-terminal phosphate cyclase signature.
Pattern [info]
[RH]-G-x(2)-P-x-G(3)-x-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 85 in 85 different sequences
Number of true positive hits 83 in 83 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 16
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.65 %
Recall (true positives / (true positives + false negatives)) 83.84 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
83 sequences

RCL1_ARATH  (Q9C578), RCL1_BOVIN  (Q2KHX8), RCL1_CAEEL  (Q23400), 
» more

UniProtKB/Swiss-Prot
False negative sequences
16 sequences

RTCA_GLOC7  (B7KCF3), RTCA_HALS3  (B0R414), RTCA_HALSA  (Q9HRE8), 
» more

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

BCL7C_HUMAN (Q8WUZ0), BCL7C_MOUSE (O08664)

		
PDB
[Detailed view]
40 PDB

1QMH; 1QMI; 3KGD; 3TUT; 3TUX; 3TV1; 3TW3; 4CLQ; 4O89; 4O8J; 5JPQ; 5TZS;
» more