PROSITE entry PS01231

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General information about the entry

PURL [info]	https://purl.expasy.org/prosite/signature/PS01231
Entry name [info]	TRMA_2
Accession [info]	PS01231
Entry type [info]	PATTERN
Date [info]	01-NOV-1997 CREATED; 01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00945

Name and characterization of the entry

Description [info]	RNA methyltransferase trmA family signature 2.
Pattern [info]	[LIVMF]-[DN]-x-F-P-[QHYWM]-[ST]-x-[HR]-[LIVMFYT]-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.

Total number of hits	463 in 463 different sequences
Number of true positive hits	463 in 463 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	97
Number of 'partial' sequences	1

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	82.68 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	463 sequences ARLMC_PYRAB (Q9UZK1), ARLMC_PYRFU (Q8U2K7), ARLMC_PYRHO (O58994), » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	97 sequences RLMC_HALNC (D0L1G3), RLMC_VIBC3 (A5F0U5), RLMC_VIBCH (Q9KL20), » more
UniProtKB/Swiss-Prot 'Partial' sequences	1 sequence TRMA_NEIGO (P55134)
PDB [Detailed view]	6 PDB 1UWV; 2BH2; 2JJQ; 2VS1; 5XJ1; 8Z62