PROSITE entry PS01209
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PURL: https://purl.expasy.org/prosite/signature/PS01209
Direct ScanProsite submission
General information about the entry
Entry name [info] | LDLRA_1 |
Accession [info] | PS01209 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00929 |
Name and characterization of the entry
Description [info] | LDL-receptor class A (LDLRA) domain signature. |
Pattern [info] |
C-[VILMA]-x(5,6)-C-[DNH]-x(3)-[DENQHT]-C-x(3,4)-[STADEW]-[DEH]-[DE]- x(1,5)-C. |
Numerical results [info]
Total number of hits | 828 in 166 different sequences |
Number of true positive hits | 827 in 165 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 1 |
Number of false negative sequences | 15 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 99.88 % |
Recall (true positives / (true positives + false negatives)) | 98.22 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 31 |
Site [info] | disulfide at position 1 |
Site [info] | disulfide at position 4 |
Site [info] | disulfide at position 8 |
Site [info] | disulfide at position 14 |
Version [info] | 2 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
165 sequences
AEGP_HUMAN (Q6UXC1), AEGP_MOUSE (A2AJA7), AEGP_RAT(Q63191),» more
|
UniProtKB/Swiss-Prot False negative sequences |
15 sequences
ALK_HUMAN (Q9UM73), ALK_MOUSE (P97793), GLU2B_BOVIN (Q28034),» more |
UniProtKB/Swiss-Prot False positive sequences |
1 sequence
MYCB2_DANRE (F1RD40) |
PDB [Detailed view] |
128 PDB
1AJJ; 1CR8; 1D2J; 1D2L; 1F5Y; 1F8Z; 1J8E; 1LDL; 1LDR; 1N7D; 1V9U; 1XFE; » more |