PROSITE entry PS01199

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General information about the entry

PURL [info]	https://purl.expasy.org/prosite/signature/PS01199
Entry name [info]	RIBOSOMAL_L1
Accession [info]	PS01199
Entry type [info]	PATTERN
Date [info]	01-NOV-1997 CREATED; 01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00922

Name and characterization of the entry

Description [info]	Ribosomal protein L1 signature.
Pattern [info]	[IMGV]-x(2)-[LIVA]-x(2,3)-[LIVMY]-[GAS]-x(2)-[LMSF]-[GSNH]-[PTKR]- [KRAVG]-[GN]-x-[LIMF]-P-[DENSTKQPRAGVI].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.

Total number of hits	870 in 870 different sequences
Number of true positive hits	868 in 868 different sequences
Number of 'unknown' hits	0
Number of false positive hits	2 in 2 different sequences
Number of false negative sequences	18
Number of 'partial' sequences	2

Precision (true positives / (true positives + false positives))	99.77 %
Recall (true positives / (true positives + false negatives))	97.97 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	868 sequences R10A1_ARATH (Q8VZB9), R10A2_ARATH (P59230), R10A3_ARATH (P59231), » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	18 sequences RL10A_DICDI (Q86L05), RL1_AERPE (Q9Y9W6), RL1_BARBK (A1USC5), » more
UniProtKB/Swiss-Prot 'Partial' sequences	2 sequences RL1_AQUPY (Q9XDM1), RL1_STRLA (O87734)
UniProtKB/Swiss-Prot False positive sequences	2 sequences COPA_ARCFU (O29777), CUL9_MOUSE (Q80TT8)
PDB [Detailed view]	387 PDB 1AD2; 1CJS; 1DWU; 1EG0; 1I2A; 1ML5; 1MZP; 1U63; 1ZHO; 2HW8; 2NOQ; 2OM7; » more