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PROSITE entry PS01131


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS01131
Entry name [info] RRNA_A_DIMETH
Accession [info] PS01131
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00871

Name and characterization of the entry

Description [info] Ribosomal RNA adenine dimethylases signature.
Pattern [info] 
[LIVMAC]-[LIVMFYWT]-[DE]-x-G-[STAPVLCG]-G-x-[GAS]-x-[LIVMF]-[ST]-x(2,3)-
[LIVMA]-x(5,8)-[LIVMYF]-x-[STAGVLC]-[LIVMFYHCS]-E-x-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 705 in 705 different sequences
Number of true positive hits 685 in 685 different sequences
Number of 'unknown' hits 0
Number of false positive hits 20 in 20 different sequences
Number of false negative sequences 38
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.16 %
Recall (true positives / (true positives + false negatives)) 94.74 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 685 sequences 

CARB_STRTH  (P13079), DIM1A_ARATH (O22268), DIM1B_ARATH (Q9FK02),
» more

UniProtKB/Swiss-Prot
False negative sequences		 38 sequences 

MTF1_KLULA  (P87250), MTF1_LACKL  (P87292), MTF1_SACPA  (Q9Y829),
» more

UniProtKB/Swiss-Prot
False positive sequences		 20 sequences 

MT25B_BOVIN (Q5E9V4), MT25B_HUMAN (Q96FB5), NTM1_DROME  (Q6NN40),
» more

PDB
[Detailed view]		 75 PDB

1QAM; 1QAN; 1QAO; 1QAQ; 1QYR; 1YUB; 1ZQ9; 2ERC; 3FTC; 3FTD; 3FTE; 3FTF;
» more