PROSITE logo

PROSITE entry PS01128


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS01128

Direct ScanProsite submission
General information about the entry

Entry name [info] SHIKIMATE_KINASE
Accession [info] PS01128
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2001 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00868

Name and characterization of the entry

Description [info] Shikimate kinase signature.
Pattern [info] 
[KR]-x(2)-E-x(3)-[LIVMF]-x(8,12)-[LIVMF](2)-[SA]-x-G(3)-x-[LIVMFG].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 437 in 437 different sequences
Number of true positive hits 429 in 429 different sequences
Number of 'unknown' hits 0
Number of false positive hits 8 in 8 different sequences
Number of false negative sequences 76
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.17 %
Recall (true positives / (true positives + false negatives)) 84.95 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 429 sequences 

ARO11_LODEL (A5H2Q8), ARO11_TALMQ (B6QWH9), ARO12_LODEL (A5H2P4),
» more

UniProtKB/Swiss-Prot
False negative sequences		 76 sequences 

ARO1_AJECN  (A6R8Q8), ARO1_CANAL  (Q5AME2), ARO1_CANDC  (B9WFG1),
» more

UniProtKB/Swiss-Prot
False positive sequences		 8 sequences 

CPKA_PYRAB  (Q9UWF8), FENR_STRGC  (A8AXQ6), FENR_STRP2  (Q04JI5),
» more

PDB
[Detailed view]		 34 PDB

1E6C; 1KAG; 1L4U; 1L4Y; 1SHK; 1U8A; 1WE2; 1ZUH; 1ZUI; 1ZYU; 2DFN; 2DFT;
» more