PROSITE entry PS01112
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PURL: https://purl.expasy.org/prosite/signature/PS01112
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General information about the entry
| Entry name [info] | RNA_POL_N_8KD |
| Accession [info] | PS01112 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1995 CREATED;
01-MAR-2002 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00856 |
Name and characterization of the entry
| Description [info] | RNA polymerases N / 8 Kd subunits signature. |
| Pattern [info] |
[LIVMFD]-[LIVMFP]-P-[LIVM]-x-C-[FL]-[ST]-C-G. |
Numerical results [info]
| Total number of hits | 74 in 74 different sequences |
| Number of true positive hits | 74 in 74 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 98.67 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Site [info] | zinc at position 6 |
| Site [info] | zinc at position 9 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
74 sequences
NRPBA_ARATH (Q8LFJ6), RPAB5_BOVIN (Q32P78), RPAB5_BRANA (Q39290),» more
|
| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
RPO10_CALMQ (A8M9S4) |
| PDB [Detailed view] |
351 PDB
1EF4; 1I3Q; 1I50; 1I6H; 1K83; 1NIK; 1NT9; 1PQV; 1R5U; 1R9S; 1R9T; 1SFO; » more |