PROSITE entry PS01095
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PURL: https://purl.expasy.org/prosite/signature/PS01095
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General information about the entry
Entry name [info] | GH18_1 |
Accession [info] | PS01095 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-NOV-1995 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00839 |
Associated ProRule [info] | PRU10053 |
Name and characterization of the entry
Description [info] | Glycosyl hydrolases family 18 (GH18) active site signature. |
Pattern [info] |
[LIVMFY]-[DN]-G-[LIVMF]-[DN]-[LIVMF]-[DN]-x-E. |
Numerical results [info]
Total number of hits | 114 in 113 different sequences |
Number of true positive hits | 102 in 101 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 12 in 12 different sequences |
Number of false negative sequences | 44 |
Number of 'partial' sequences | 6 |
Precision (true positives / (true positives + false positives)) | 89.47 % |
Recall (true positives / (true positives + false negatives)) | 69.86 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
Maximum number of repetitions [info] | 2 |
Site [info] | active_site at position 9 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
101 sequences
CHI10_DROME (Q9W5U2), CHI18_ENTFA (Q838S2), CHI1_APHAL (P32470),» more
|
UniProtKB/Swiss-Prot False negative sequences |
44 sequences
CH3L1_BOVIN (P30922), CH3L1_BUBBU (Q7YS85), CH3L1_CAPHI (Q8SPQ0),» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
6 sequences
CAI_PHAVU (P84708), CHI1_STROI (P29115), CHI2_STROI (P29116),» more |
UniProtKB/Swiss-Prot False positive sequences |
12 sequences
CAPSD_CPVBM (Q6TS43), CAPSD_LDCPR (Q91IE1), CCNL2_XENTR (Q5BKF8),» more |
PDB [Detailed view] |
114 PDB
1C3F; 1CTN; 1D2K; 1EDT; 1FFQ; 1FFR; 1GOI; 1GUV; 1H0G; 1H0I; 1HKI; 1HKJ; » more |