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PROSITE entry PS01090


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PURL: https://purl.expasy.org/prosite/signature/PS01090

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General information about the entry

Entry name [info] TATD_2
Accession [info] PS01090
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-NOV-1995 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00836

Name and characterization of the entry

Description [info] TatD deoxyribonuclease family signature 2.
Pattern [info]
P-[LIVM]-x-[LIVM]-H-x-R-x-[TA]-x-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 26 in 26 different sequences
Number of true positive hits 22 in 22 different sequences
Number of 'unknown' hits 0
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 37
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 84.62 %
Recall (true positives / (true positives + false negatives)) 37.29 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
22 sequences

TATD2_HUMAN (Q93075), TATD_ECOLI  (P27859), TATD_ENT38  (A4WFX9), 
» more

UniProtKB/Swiss-Prot
False negative sequences
37 sequences

DTD3_SYNY3  (P73335), TAT3A_XENLA (Q05AV0), TATD1_BOVIN (Q148G4), 
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

YMES_GEOSE  (P23918)

		
UniProtKB/Swiss-Prot
False positive sequences
4 sequences

GLGE_CORGL  (Q8NR39), PKHG7_HUMAN (Q6ZR37), TOF1_EMENI  (Q5AXH3), 
» more

PDB
[Detailed view]
4 PDB

1XWY; 1ZZM; 4P5U; 4PE8