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PROSITE entry PS01081


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PURL: https://purl.expasy.org/prosite/signature/PS01081

Direct ScanProsite submission
General information about the entry

Entry name [info] HTH_TETR_1
Accession [info] PS01081
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00830

Name and characterization of the entry

Description [info] TetR-type HTH domain signature.
Pattern [info] 
[GS]-[LIVMFYSP]-x(2,3)-[TS]-[LIVMTA]-x(2)-[LIVM]-x(5)-[LIVQSA]-
[STAGENQH]-x-[GPART]-x-[LIVMFA]-[FYSTNRH]-x-[HFYRA]-[FVW]-x-[DNSTKAG]-
[KQMT]-x(2,3)-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 228 in 228 different sequences
Number of true positive hits 228 in 228 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 156
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 59.38 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 228 sequences 

ABRTH_SACEN (A4FLS1), ACRR_ECOL6  (P0ACT0), ACRR_ECOLI  (P0ACS9),
» more

UniProtKB/Swiss-Prot
False negative sequences		 156 sequences 

ABRT_STRLN  (P0DXG2), ACNR_CORDI  (Q6NH62), ACNR_COREF  (Q8FTA6),
» more

PDB
[Detailed view]		 128 PDB

1A6I; 1BJZ; 1JT0; 1JT6; 1JTX; 1JTY; 1JUM; 1JUP; 1JUS; 1ORK; 1QPI; 1QVT;
» more