PROSITE entry PS01073

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General information about the entry

Entry name [info]	RIBOSOMAL_L24E
Accession [info]	PS01073
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-DEC-2004 DATA UPDATE; 27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00824

Name and characterization of the entry

Description [info]	Ribosomal protein L24e signature.
Pattern [info]	[FY]-x-[GSHE]-x(2)-[IVLF]-x-P-[GA]-x-G-x(2)-[FYV]-x-[KRHE]-x-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.

Total number of hits	88 in 88 different sequences
Number of true positive hits	88 in 88 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	11
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	88.89 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

88 sequences

RL241_ARATH (Q42347), RL242_ARATH (P38666), RL24A_CANAL (Q5A6A1),

RL24A_SCHPO (Q92354), RL24A_YEAST (P04449), RL24B_SCHPO (O74884), 
RL24B_YEAST (P24000), RL24E_ARCFU (O29492), RL24E_CALMQ (A8MB69), 
RL24E_HALMA (P14116), RL24E_HALS3 (B0R501), RL24E_HALSA (P61120), 
RL24E_HYPBU (A2BK96), RL24E_META3 (A6UT49), RL24E_METAC (Q8TQL7), 
RL24E_METBU (Q12Z95), RL24E_METJA (P54064), RL24E_METKA (Q8TVE8), 
RL24E_METM5 (A4FYI7), RL24E_METM6 (A9A7E7), RL24E_METM7 (A6VJU5), 
RL24E_METMA (Q8PU76), RL24E_METMP (P61123), RL24E_METTH (O26357), 
RL24E_METVS (A6USH5), RL24E_PICTO (Q6KZI5), RL24E_PYRAB (Q9V0W3), 
RL24E_PYRAE (Q8ZTA6), RL24E_PYRAR (A4WLP2), RL24E_PYRCJ (A3MTA8), 
RL24E_PYRFU (Q8U158), RL24E_PYRHO (P61124), RL24E_PYRIL (A1RS34), 
RL24E_PYRNV (B1Y9V3), RL24E_SACS2 (Q980Q6), RL24E_STAMF (A3DMR8), 
RL24E_SULAC (Q4JAV2), RL24E_SULIA (C3MZM3), RL24E_SULIK (C4KIV3), 
RL24E_SULIL (C3MRJ8), RL24E_SULIM (C3MY94), RL24E_SULIN (C3NFS8), 
RL24E_SULIY (C3N7P5), RL24E_SULTO (Q975Z9), RL24E_THEAC (Q9HJ58), 
RL24E_THEGJ (C5A1V7), RL24E_THEKO (Q5JGR5), RL24E_THEON (B6YWH7), 
RL24E_THEPD (A1RXH7), RL24E_THESM (C6A1J2), RL24E_THEVO (Q97BK6), 
RL24_BOVIN  (Q862I1), RL24_BRABE  (Q8ISQ3), RL24_CANGA  (Q6FXY9), 
RL24_CICAR  (O65743), RL24_DANRE  (Q8JGR4), RL24_DEBHA  (Q6BNC2), 
RL24_DICDI  (Q54VN6), RL24_EREGS  (Q752U6), RL24_FELCA  (Q66WF5), 
RL24_GILMI  (Q9DFQ7), RL24_HORVU  (P50888), RL24_HUMAN  (P83731), 
RL24_ICTPU  (Q90YU3), RL24_KLULA  (P38665), RL24_MACFA  (P61122), 
RL24_MOUSE  (Q8BP67), RL24_NEUCR  (Q7SDU2), RL24_PAGMA  (Q6Y263), 
RL24_PRUAV  (Q9FUL4), RL24_RABIT  (G1SE28), RL24_RAT(P83732), 
RL24_SCHJA  (Q7Z0T8), RL24_YARLI  (Q6C4U6), RLP24_ARATH (O22165), 
RLP24_BOVIN (Q3SZ12), RLP24_CAEEL (Q17606), RLP24_CANGA (Q6FPU0), 
RLP24_DANRE (Q7ZTZ2), RLP24_DICDI (Q86B05), RLP24_DROME (Q9VGN9), 
RLP24_EREGS (Q759D1), RLP24_HUMAN (Q9UHA3), RLP24_MOUSE (Q99L28), 
RLP24_PONAB (Q5RF04), RLP24_RAT   (Q6P6G7), RLP24_SCHPO (Q10353), 
RLP24_YARLI (Q6CF69)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

11 sequences

RL24E_AERPE (Q9Y9A7), RL24E_METS3 (A5UJN1), RL24E_METS5 (A4YCQ3),

RL24E_METTP (A0B603), RL24_CAEEL  (O01868), RL24_DROME  (Q9VJY6), 
RL24_PLUXY  (Q6F444), RL24_TETTS  (P0DJ54), RLP24_DEBHA (Q6BH34), 
RLP24_ENCCU (Q8SSF6), RLP24_KLULA (Q6CNW3)

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PDB
[Detailed view]

381 PDB

1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1ML5; 1N8R; 1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 2X7N; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3J6X; 3J6Y; 3J77; 3J78; 3OW2; 4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V42; 4V4B; 4V4N; 4V4R; 4V4S; 4V4T; 4V6I; 4V6U; 4V6X; 4V7R; 4V88; 4V8T; 4V8Y; 4V8Z; 4V91; 4V9F; 5AJ0; 5AN9; 5ANB; 5ANC; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5GAK; 5H4P; 5I4L; 5IT7; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5LZS; 5LZT; 5LZU; 5LZV; 5LZW; 5LZX; 5LZY; 5LZZ; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 6D90; 6D9J; 6FTG; 6FTI; 6FTJ; 6GQ1; 6GQB; 6GQV; 6GZ3; 6HCF; 6HCM; 6HD7; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6LQM; 6LSR; 6LSS; 6LU8; 6MTB; 6MTC; 6MTD; 6MTE; 6N8M; 6N8N; 6N8O; 6OIG; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6P5I; 6P5J; 6P5K; 6P5N; 6Q8Y; 6QIK; 6QKL; 6QT0; 6QTZ; 6QZP; 6R5Q; 6R6G; 6R6P; 6R7Q; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SGC; 6SKF; 6SKG; 6SNT; 6SV4; 6SWA; 6T4Q; 6T59; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6UZ7; 6W6L; 6WOO; 6XA1; 6Y0G; 6Y2L; 6Y57; 6Y6X; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZVK; 7A01; 7AZY; 7B7D; 7BHP; 7CPU; 7CPV; 7F5S; 7LS1; 7LS2; 7MDZ; 7MPI; 7MPJ; 7N8B; 7NFX; 7NRC; 7NRD; 7O7Y; 7O7Z; 7O80; 7O81; 7OBR; 7OW7; 7OYD; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QWQ; 7QWR; 7QWS; 7R81; 7TM3; 7TOQ; 7TOR; 7TUT; 7UCJ; 7UCK; 7XNX; 7XNY; 7ZJW; 7ZJX; 7ZPQ; 7ZRS; 7ZS5; 7ZUW; 7ZUX; 7ZW0; 8A3D; 8AAF; 8AGT; 8AGU; 8AGV; 8AGW; 8AGX; 8AGZ; 8B5L; 8B6C; 8BIP; 8BJQ; 8BPO; 8BQD; 8BQX; 8BTK; 8CCS; 8CDL; 8CDR; 8CEH; 8CF5; 8CG8; 8CGN; 8CIV; 8CKU; 8CMJ; 8ESQ; 8ESR; 8ETC; 8ETG; 8ETH; 8ETI; 8ETJ; 8EUG; 8EUI; 8EUP; 8EUY; 8EV3; 8FKP; 8FKQ; 8FKR; 8FKS; 8FKT; 8FKU; 8FKV; 8FKW; 8FKX; 8FKY; 8FKZ; 8FL0; 8FL2; 8FL3; 8FL4; 8FL6; 8FL7; 8FL9; 8FLA; 8FLB; 8FLC; 8FLD; 8FLE; 8FLF; 8G5Y; 8G60; 8G61; 8G6J; 8GLP; 8HKU; 8HKV; 8HKY; 8HKZ; 8HL2; 8HL3; 8HL4; 8HL5; 8IDT; 8IDY; 8IE3; 8INE; 8INF; 8INK; 8IPD; 8IPX; 8IPY; 8IR1; 8IR3; 8JDJ; 8JDK; 8JDL; 8JDM; 8P2K
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