PROSITE entry PS01040
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PURL: https://purl.expasy.org/prosite/signature/PS01040
Direct ScanProsite submission
General information about the entry
Entry name [info] | SBP_BACTERIAL_5 |
Accession [info] | PS01040 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-JUL-1999 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00799 |
Name and characterization of the entry
Description [info] | Bacterial extracellular solute-binding proteins, family 5 signature. |
Pattern [info] |
[AG]-x(6,7)-[DNEG]-x(2)-[STAIVE]-[LIVMFYWA]-x-[LIVMFY]-x-[LIVM]-[KR]- [KRHDE]-[GDN]-[LIVMA]-[KNGSP]-[FW]. |
Numerical results [info]
Total number of hits | 48 in 48 different sequences |
Number of true positive hits | 48 in 48 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 22 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 68.57 % |
Comments [info]
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
48 sequences
ALIA_STRPN (P35592), ALIB_STRPN (P0A4G0), ALIB_STRR6 (P0A4G1),» more
|
UniProtKB/Swiss-Prot False negative sequences |
22 sequences
AGPA_RHIME (Q9X4Y1), DPPA2_PSEAB (A0A0H2ZGW2), DPPA4_PSEAB (A0A0H2ZGV7),» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
OPPA_LACLC (P0C2B3) |
PDB [Detailed view] |
85 PDB
1B05; 1B0H; 1B1H; 1B2H; 1B32; 1B3F; 1B3G; 1B3H; 1B3L; 1B40; 1B46; 1B4H; » more |