PROSITE entry PS01039
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PURL: https://purl.expasy.org/prosite/signature/PS01039
Direct ScanProsite submission
General information about the entry
Entry name [info] | SBP_BACTERIAL_3 |
Accession [info] | PS01039 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00798 |
Name and characterization of the entry
Description [info] | Bacterial extracellular solute-binding proteins, family 3 signature. |
Pattern [info] |
G-[FYIL]-[DE]-[LIVMT]-[DE]-[LIVMF]-{PS}-{YG}-x-[LIVMA]-[VAGC]-{TPRG}- {GL}-[LIVMAGN]. |
Numerical results [info]
Total number of hits | 69 in 69 different sequences |
Number of true positive hits | 39 in 39 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 30 in 30 different sequences |
Number of false negative sequences | 10 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 56.52 % |
Recall (true positives / (true positives + false negatives)) | 79.59 % |
Comments [info]
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 2 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
39 sequences
AABA_DICNO (P39906), AAPJ_RHIJ3 (Q52812), ARGBP_PSEAE (G3XD47),» more
|
UniProtKB/Swiss-Prot False negative sequences |
10 sequences
ARGT_CORGL (Q8NQU2), ARTJ_CHLPN (Q9Z869), ARTJ_CHLTR (O84385),» more |
UniProtKB/Swiss-Prot False positive sequences |
30 sequences
DCL3_ARATH (Q9LXW7), ECHD2_BOVIN (Q2TBT3), HIS61_PROMM (Q7V8Q8),» more |
PDB [Detailed view] |
44 PDB
1GGG; 1HPB; 1HSL; 1LAF; 1LAG; 1LAH; 1LST; 1WDN; 2IEE; 2LAO; 2V25; 3KBR; » more |