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PROSITE entry PS01033


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PURL: https://purl.expasy.org/prosite/signature/PS01033

Direct ScanProsite submission
General information about the entry

Entry name [info] GLOBIN
Accession [info] PS01033
Entry type [info] MATRIX
Date [info] 01-JUN-1994 CREATED;
29-MAY-2024 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00793
Associated ProRule [info] PRU00238

Name and characterization of the entry

Description [info] Globin domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=146;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=146;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.3777041; R2=0.0081933; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=931; N_SCORE=10.0; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=504; N_SCORE=6.5; MODE=1; TEXT='R?';
/DEFAULT: M0=-30; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 1'197 in 1'192 different sequences
Number of true positive hits 1'197 in 1'192 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 5
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] Globin
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
1192 sequences

BAHG_VITST  (P04252), CYGB1_DANRE (Q8UUR3), CYGB1_ORYLA (Q575T0), 
» more

UniProtKB/Swiss-Prot
'Partial' sequences
5 sequences

GLB4_LAMSP  (P20413), HBB2_SAAHA  (P18992), HBBC_CATCL  (P85311), 
» more

PDB
[Detailed view]
1224 PDB

101M; 102M; 103M; 104M; 105M; 106M; 107M; 108M; 109M; 110M; 111M; 112M;
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