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PROSITE entry PS00889


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PURL: https://purl.expasy.org/prosite/signature/PS00889

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General information about the entry

Entry name [info] CNMP_BINDING_2
Accession [info] PS00889
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-OCT-1993 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00691

Name and characterization of the entry

Description [info] Cyclic nucleotide-binding domain signature 2.
Pattern [info]
[LIVMF]-G-E-x-[GAS]-[LIVM]-x(5,11)-R-[STAQ]-A-x-[LIVMA]-x-[STACV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 186 in 121 different sequences
Number of true positive hits 179 in 114 different sequences
Number of 'unknown' hits 0
Number of false positive hits 7 in 7 different sequences
Number of false negative sequences 197
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 96.24 %
Recall (true positives / (true positives + false negatives)) 47.61 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 3
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
114 sequences

CNBD2_MOUSE (Q9D5U8), CNG1_CHICK  (Q90805), CNG3_CHICK  (Q90980), 
» more

UniProtKB/Swiss-Prot
False negative sequences
197 sequences

ACH1_ARATH  (Q5FYU1), AKT1_ARATH  (Q38998), AKT1_ORYSI  (P0C550), 
» more

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

KAP0_MESAU  (P86244), KAP2_PIG(P05207)

		
UniProtKB/Swiss-Prot
False positive sequences
7 sequences

ERYH_BRUA2  (Q2YIQ6), ERYH_BRUAB  (P0C119), ERYH_BRUME  (Q8YCV3), 
» more

PDB
[Detailed view]
180 PDB

1CGP; 1CX4; 1G6N; 1HW5; 1I5Z; 1I6X; 1J59; 1LB2; 1NE4; 1NE6; 1O3Q; 1O3R;
» more