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PROSITE entry PS00888


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PURL: https://purl.expasy.org/prosite/signature/PS00888

Direct ScanProsite submission
General information about the entry

Entry name [info] CNMP_BINDING_1
Accession [info] PS00888
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00691

Name and characterization of the entry

Description [info] Cyclic nucleotide-binding domain signature 1.
Pattern [info]
[LIVM]-[VIC]-x-{H}-G-[DENQTA]-x-[GAC]-{L}-x-[LIVMFY](4)-x(2)-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 188 in 130 different sequences
Number of true positive hits 177 in 119 different sequences
Number of 'unknown' hits 0
Number of false positive hits 11 in 11 different sequences
Number of false negative sequences 190
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 94.15 %
Recall (true positives / (true positives + false negatives)) 48.23 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 3
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
119 sequences

CNBD2_HUMAN (Q96M20), CNBD2_MACFA (Q95JR6), CNBD2_MOUSE (Q9D5U8), 
» more

UniProtKB/Swiss-Prot
False negative sequences
190 sequences

ACH1_ARATH  (Q5FYU1), AKT1_ARATH  (Q38998), AKT1_ORYSI  (P0C550), 
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

KAP2_PIG(P05207)

		
UniProtKB/Swiss-Prot
False positive sequences
11 sequences

ALG11_HUMAN (Q2TAA5), ALG11_PONAB (Q5R7Z6), CARA_SULTO  (Q970U8), 
» more

PDB
[Detailed view]
216 PDB

1CGP; 1CX4; 1G6N; 1HW5; 1I5Z; 1I6X; 1J59; 1LB2; 1NE4; 1NE6; 1O3Q; 1O3R;
» more