PROSITE entry PS00854
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General information about the entry
| Entry name [info] | PROTEASOME_BETA_1 |
| Accession [info] | PS00854 |
| Entry type [info] | PATTERN |
| Date [info] |
01-OCT-1993 CREATED;
01-JUL-2013 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00668 |
Name and characterization of the entry
| Description [info] | Proteasome beta-type subunits signature. |
| Pattern [info] |
[LIVMACFT]-[GSA]-[LIVMF]-x-[FYLVGAC]-x(2)-[GSACFYI]-[LIVMSTACF]- [LIVMSTAC]-[LIVMFSTAC]-[GACI]-[GSTACV]-[DES]-x(15,16)-[RK]-x(12,13)-G- x(2)-[GSTA]-D. |
Numerical results [info]
| Total number of hits | 218 in 218 different sequences |
| Number of true positive hits | 207 in 207 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 11 in 11 different sequences |
| Number of false negative sequences | 95 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 94.95 % |
| Recall (true positives / (true positives + false negatives)) | 68.54 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
207 sequences
PB6LA_SALSA (A7KE01), PB6LB_SALSA (A7KII6), PSB10_BOVIN (Q3T0T1), PSB10_HUMAN (P40306), PSB10_MOUSE (O35955), PSB10_RAT (Q4KM35), PSB11_HUMAN (A5LHX3), PSB11_MOUSE (Q8BG41), PSB1A_CARAU (Q9IB84), PSB1B_CARAU (Q9IB83), PSB1_AERPE (Q9YES4), PSB1_ARATH (P42742), PSB1_BOVIN (Q2TBX6), PSB1_CAEEL (P34286), PSB1_CENSY (A0RU86), PSB1_DANRE (Q6DRF3), PSB1_DICDI (Q86A21), PSB1_DROME (P40304), PSB1_ENCCU (Q8SR11), PSB1_HUMAN (P20618), PSB1_HYPBU (A2BN24), PSB1_IGNH4 (A8AA46), PSB1_KORCO (B1L6S7), PSB1_METS5 (A4YIE0), PSB1_MOUSE (O09061), PSB1_NITMS (A9A4A1), PSB1_ORYSJ (O64464), PSB1_PETHY (O82531), PSB1_PYRAB (Q9V247), PSB1_PYRAE (Q8ZYF2), PSB1_PYRAR (A4WH05), PSB1_PYRCJ (A3MS44), PSB1_PYRFU (Q8U4C9), PSB1_PYRHO (O57983), PSB1_PYRIL (A1RSJ8), PSB1_PYRNV (B1YA36), PSB1_RAT(P18421), PSB1_SACS2 (Q980L4), PSB1_SACS9 (D0KRX1), PSB1_SCHPO (O43063), PSB1_STAMF (A3DN21), PSB1_SULIA (C3N5N4), PSB1_SULID (D2PK63), PSB1_SULIK (C4KHB0), PSB1_SULIL (C3MQ16), PSB1_SULIM (C3MVD5), PSB1_SULIN (C3NFX2), PSB1_SULIY (C3NE98), PSB1_SULTO (Q975U8), PSB1_THEGJ (C5A7L1), PSB1_THEKO (Q5JDJ9), PSB1_THEON (B6YSW2), PSB1_THEPD (A1RWY6), PSB1_TRYBB (Q9U794), PSB1_YEAST (P38624), PSB2A_ARATH (O23714), PSB2B_ARATH (O24633), PSB2_BOVIN (Q5E9K0), PSB2_CALMQ (A8M8R5), PSB2_CENSY (A0RXV1), PSB2_DROME (Q9VQE5), PSB2_ENCCU (Q8SQN7), PSB2_HUMAN (P49721), PSB2_HYPBU (A2BN27), PSB2_KORCO (B1L6X8), PSB2_MOUSE (Q9R1P3), PSB2_NITMS (A9A2U7), PSB2_ORYSJ (Q9LST6), PSB2_PYRAB (Q9V0N9), PSB2_PYRAE (Q8ZST5), PSB2_PYRAR (A4WMZ0), PSB2_PYRFU (Q8U125), PSB2_PYRHO (O50110), PSB2_PYRIL (A1RTI7), PSB2_PYRNV (B1YDJ0), PSB2_RAT(P40307), PSB2_SACS2 (Q9UXF3), PSB2_SACS9 (D0KTH0), PSB2_SCHPO (Q09841), PSB2_STAMF (A3DN27), PSB2_SULAC (Q4JAA8), PSB2_SULIA (C3MZI0), PSB2_SULID (D2PDG6), PSB2_SULIK (C4KIR0), PSB2_SULIL (C3MRE5), PSB2_SULIM (C3MY41), PSB2_SULIN (C3NHF1), PSB2_SULIY (C3N7K2), PSB2_SULTO (Q975D1), PSB2_THEGJ (C5A2D5), PSB2_THEON (B6YXV3), PSB2_THEPD (A1RX71), PSB2_THESM (C6A3R1), PSB2_YEAST (P25043), PSB3A_ARATH (Q9XI05), PSB3B_ARATH (O81153), PSB3_BOVIN (P33672), PSB3_CAEEL (Q23237), PSB3_DROME (Q9XYN7), PSB3_GIAIN (Q9N9W8), PSB3_HUMAN (P49720), PSB3_MOUSE (Q9R1P1), PSB3_ONCMY (O73817), PSB3_ORYSJ (Q9LST7), PSB3_PICMA (O65084), PSB3_RAT(P40112), PSB3_SCHPO (Q9Y7T8), PSB3_TRYBB (Q9NDA1), PSB3_YEAST (P25451), PSB4_ARATH (Q7DLR9), PSB4_BOVIN (Q3T108), PSB4_CRYNB (P0CQ13), PSB4_CRYNJ (P0CQ12), PSB4_DICDI (Q556Q0), PSB4_DROME (Q9VNA5), PSB4_ENCCU (Q8SRF1), PSB4_HUMAN (P28070), PSB4_MOUSE (P99026), PSB4_NEUCR (Q9P6U7), PSB4_PICGU (A5DB52), PSB4_PIG(Q29384), PSB4_RAT(P34067), PSB4_SCHPO (Q09720), PSB4_XENLA (P28024), PSB4_YEAST (P22141), PSB5A_ARATH (O23717), PSB5B_ARATH (Q9LIP2), PSB5_BOVIN (Q32KL2), PSB5_CHICK (P34065), PSB5_HUMAN (P28074), PSB5_MOUSE (O55234), PSB5_PONAB (Q5R8S2), PSB5_RAT(P28075), PSB5_SCHPO (P30655), PSB5_SPIOL (O24361), PSB5_YEAST (P30656), PSB6_ARATH (Q8LD27), PSB6_BOVIN (Q3MHN0), PSB6_DICDI (Q55GJ6), PSB6_HUMAN (P28072), PSB6_MOUSE (Q60692), PSB6_RAT(P28073), PSB6_SCHPO (Q9UQY2), PSB6_TOBAC (P93395), PSB6_YEAST (P23724), PSB7A_ARATH (O23710), PSB7B_ARATH (Q7DLS1), PSB7_BOVIN (Q2TBP0), PSB7_DICDI (Q54QR2), PSB7_ENCCU (Q8SS01), PSB7_HUMAN (Q99436), PSB7_MOUSE (P70195), PSB7_PIG(A1XQU1), PSB7_RAT(Q9JHW0), PSB7_SCHPO (Q9USQ9), PSB7_YEAST (P30657), PSB8_BOVIN (Q3T112), PSB8_CANLF (Q5W416), PSB8_HUMAN (P28062), PSB8_MOUSE (P28063), PSB8_RAT(P28064), PSB9_BOVIN (Q3SZC2), PSB9_HUMAN (P28065), PSB9_MOUSE (P28076), PSB9_MUSMB (O35522), PSB9_MUSPL (O35523), PSB9_MUSSI (O35524), PSB9_MUSTR (O35521), PSB9_ONCMY (Q9PT26), PSB9_ORYLA (Q8UW64), PSB9_RAT(P28077), PSB9_SALSA (Q9DD33), PSB_ARCFU (Q9P996), PSB_ARCPA (D2RGT4), PSB_FERPA (D3RX66), PSB_META3 (A6UT20), PSB_METAC (Q8TJB5), PSB_METAR (Q0W2D6), PSB_METB6 (A7I841), PSB_METBF (Q46G14), PSB_METBU (Q12YV7), PSB_METFA (C7P6N4), PSB_METHJ (Q2FQL8), PSB_METJA (Q58634), PSB_METKA (Q8TW10), PSB_METLZ (A2SS78), PSB_METM5 (A4FYA5), PSB_METM6 (A9A788), PSB_METM7 (A6VK02), PSB_METMA (Q8PZ04), PSB_METMJ (A3CUS9), PSB_METMP (Q6LZD4), PSB_METMS (D5EAS6), PSB_METPE (B8GG66), PSB_METPS (D1Z199), PSB_METRM (D3E0A3), PSB_METS3 (A5UM14), PSB_METSF (D3S8M7), PSB_METTE (Q9P992), PSB_METTH (O27270), PSB_METTP (A0B5B1), PSB_METVM (C9REN7), PSB_METVS (A6USJ3), PSB_NANEQ (Q74MP5), PSB_PICTO (Q6L181), PSB_THEAC (P28061), PSB_THEVO (Q97AZ7)» more
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| UniProtKB/Swiss-Prot False negative sequences |
95 sequences
PBS5_CAEEL (Q9XUV0), PSB1_CALMQ (A8MBW0), PSB1_DESA1 (B8D673), PSB1_HALMA (Q5V4S6), PSB1_HALTV (D2RQX3), PSB1_RHOER (Q53079), PSB1_SALTO (A4X3P0), PSB1_STRAW (Q82JE3), PSB1_SULAC (Q4JAY3), PSB1_THECD (D1A2S9), PSB1_THESM (C6A2V9), PSB2_AERPE (Q9YER0), PSB2_CAEEL (P91477), PSB2_DESA1 (B8D683), PSB2_DICDI (Q55DY7), PSB2_HALMA (Q5V1D5), PSB2_HALTV (D2RUI0), PSB2_IGNH4 (A8AB58), PSB2_METS5 (A4YJ04), PSB2_PYRCJ (A3MXQ6), PSB2_RHOER (Q53083), PSB2_SALTO (A4X744), PSB2_STRAW (Q828I8), PSB2_THECD (D1A3V2), PSB2_THEKO (Q5JHL8), PSB2_TRYBB (Q9NHC6), PSB3_DICDI (Q55D66), PSB5_DICDI (Q54BC8), PSB6_ENCCU (Q8SRH6), PSB_ACIB4 (B5IEE5), PSB_ACIC1 (A0LU50), PSB_ACIFD (C7LYP7), PSB_ACTMD (C6WID8), PSB_ARTS2 (A0JWY6), PSB_BEUC1 (C5BVA2), PSB_CATAD (C7PVV2), PSB_FRAAA (Q0RLT7), PSB_FRACC (Q2J9Q3), PSB_FRASN (A8LH54), PSB_GEOOG (D2S6E2), PSB_GORB4 (D0LDT1), PSB_HALLT (B9LTS6), PSB_HALMD (C7NVQ4), PSB_HALS3 (B0R4C8), PSB_HALSA (Q9HR36), PSB_HALUD (C7NQ99), PSB_HALVD (D4GYZ1), PSB_HALWD (Q18GX3), PSB_JONDD (C7R403), PSB_KINRD (A6W970), PSB_KRIFD (D2Q4H4), PSB_METST (Q2NI68), PSB_MYCA1 (A0QFB5), PSB_MYCA9 (B1MAI2), PSB_MYCBO (Q7TZ13), PSB_MYCBP (A1KKF3), PSB_MYCBT (C1AQ26), PSB_MYCGI (A4TB64), PSB_MYCLB (B8ZRF3), PSB_MYCLE (Q49780), PSB_MYCMM (B2HFV6), PSB_MYCPA (Q73YW8), PSB_MYCS2 (A0QZ47), PSB_MYCSJ (A3Q193), PSB_MYCSK (A1UHS7), PSB_MYCSS (Q1B797), PSB_MYCTA (A5U4D6), PSB_MYCTF (A5WP84), PSB_MYCTK (C6DPV1), PSB_MYCTO (P9WHT8), PSB_MYCTU (P9WHT9), PSB_MYCUA (A0PQT3), PSB_MYCVP (A1TAP4), PSB_NAKMY (C8XAQ4), PSB_NATMM (D3SSQ6), PSB_NATPD (Q3IPX1), PSB_NOCFA (Q5YUX2), PSB_NOCSJ (A1SK13), PSB_PAEAT (A1R6Q7), PSB_PSECP (B8H8L6), PSB_RENSM (A9WSI1), PSB_RHOE4 (C0ZZU7), PSB_RHOJR (Q0SIF9), PSB_RHOOB (C1ASP7), PSB_SACEN (A4FBY1), PSB_SACVD (C7MWV7), PSB_SALAI (A8M2A3), PSB_SANKS (D1BHT9), PSB_STANL (D3Q557), PSB_STRCO (Q7AKQ5), PSB_STRGG (B1W306), PSB_STRRD (D2ATV1), PSB_STRSW (C9Z4D0), PSB_THEFY (Q47NZ4), PSB_XYLCX (D1BS26)» more |
| UniProtKB/Swiss-Prot False positive sequences |
11 sequences
PSA3_SCHPO (Q09682), PSA3_YEAST (P23638), PSA4_BOVIN (Q3ZCK9), PSA4_DICDI (P34119), PSA4_DROME (P18053), PSA4_HUMAN (P25789), PSA4_MACFA (Q4R932), PSA4_MOUSE (Q9R1P0), PSA4_RAT(P21670), PSA4_SPIOL (P52427), PSA4_YEAST (P40303)» more |
| PDB [Detailed view] |
450 PDB
1FNT; 1G0U; 1G65; 1IRU; 1J2Q; 1JD2; 1PMA; 1RYP; 1YA7; 1YAR; 1YAU; 1Z7Q; 2F16; 2FAK; 2GPL; 2ZCY; 3BDM; 3C91; 3C92; 3D29; 3DY3; 3DY4; 3E47; 3GPJ; 3GPT; 3GPW; 3H4P; 3HYE; 3IPM; 3J9I; 3JCO; 3JCP; 3JRM; 3JSE; 3JTL; 3MG0; 3MG4; 3MG6; 3MG7; 3MG8; 3NZJ; 3NZW; 3NZX; 3OEU; 3OEV; 3OKJ; 3SDI; 3SDK; 3SHJ; 3TDD; 3UN4; 3UN8; 3UNB; 3UNE; 3UNF; 3UNH; 3WXR; 4CR2; 4CR3; 4CR4; 4EU2; 4FZC; 4FZG; 4G4S; 4GK7; 4HNP; 4HRC; 4HRD; 4INR; 4INT; 4INU; 4J70; 4JSQ; 4JSU; 4JT0; 4LQI; 4LTC; 4NNN; 4NNW; 4NO1; 4NO6; 4NO8; 4NO9; 4Q1S; 4QBY; 4QLQ; 4QLS; 4QLT; 4QLU; 4QLV; 4QUX; 4QUY; 4QV0; 4QV1; 4QV3; 4QV4; 4QV5; 4QV6; 4QV7; 4QV8; 4QV9; 4QVL; 4QVM; 4QVN; 4QVP; 4QVQ; 4QVV; 4QVW; 4QVY; 4QW0; 4QW1; 4QW3; 4QW4; 4QW5; 4QW6; 4QW7; 4QWF; 4QWG; 4QWI; 4QWJ; 4QWK; 4QWL; 4QWR; 4QWS; 4QWU; 4QWX; 4QXJ; 4QZ0; 4QZ1; 4QZ2; 4QZ3; 4QZ4; 4QZ5; 4QZ6; 4QZ7; 4QZW; 4QZX; 4QZZ; 4R00; 4R02; 4R17; 4R18; 4R3O; 4R67; 4RUR; 4V7O; 4X6Z; 4Y69; 4Y6A; 4Y6V; 4Y6Z; 4Y70; 4Y74; 4Y75; 4Y77; 4Y78; 4Y7W; 4Y7X; 4Y7Y; 4Y80; 4Y81; 4Y82; 4Y84; 4Y8G; 4Y8H; 4Y8I; 4Y8J; 4Y8K; 4Y8L; 4Y8M; 4Y8N; 4Y8O; 4Y8P; 4Y8Q; 4Y8R; 4Y8S; 4Y8T; 4Y8U; 4Y9Y; 4Y9Z; 4YA0; 4YA1; 4YA2; 4YA3; 4YA4; 4YA5; 4YA7; 4YA9; 4Z1L; 5A0Q; 5A5B; 5AHJ; 5BOU; 5BXL; 5BXN; 5CGF; 5CGG; 5CGH; 5CGI; 5CZ4; 5CZ5; 5CZ6; 5CZ7; 5CZ8; 5CZ9; 5CZA; 5D0S; 5D0T; 5D0V; 5D0W; 5D0X; 5D0Z; 5DKI; 5DKJ; 5FG7; 5FG9; 5FGA; 5FGD; 5FGE; 5FGF; 5FGG; 5FGH; 5FGI; 5FHS; 5GJQ; 5GJR; 5JHR; 5JHS; 5L4G; 5L52; 5L54; 5L55; 5L5A; 5L5B; 5L5D; 5L5E; 5L5F; 5L5H; 5L5I; 5L5J; 5L5O; 5L5P; 5L5Q; 5L5R; 5L5S; 5L5T; 5L5U; 5L5V; 5L5W; 5L5X; 5L5Y; 5L5Z; 5L60; 5L61; 5L62; 5L63; 5L64; 5L65; 5L66; 5L67; 5L68; 5L69; 5L6A; 5L6B; 5L6C; 5LAI; 5LAJ; 5LE5; 5LEX; 5LEY; 5LEZ; 5LF0; 5LF1; 5LF3; 5LF4; 5LF6; 5LF7; 5LN3; 5LTT; 5M2B; 5M32; 5MP9; 5MPA; 5MPB; 5MPC; 5NIF; 5T0C; 5T0G; 5T0H; 5T0I; 5T0J; 5VFO; 5VFP; 5VFQ; 5VFR; 5VFS; 5VFT; 5VFU; 5VY3; 5VY4; 5WVI; 5WVK; 6AVO; 6BDF; 6E5B; 6EF3; 6EPC; 6EPD; 6EPE; 6EPF; 6FVT; 6FVU; 6FVV; 6FVW; 6FVX; 6FVY; 6G7F; 6G8M; 6G8N; 6GOP; 6H39; 6HE5; 6HE7; 6HE8; 6HE9; 6HEA; 6HEC; 6HED; 6HTB; 6HTC; 6HTD; 6HTP; 6HTR; 6HUB; 6HUC; 6HUQ; 6HUU; 6HUV; 6HV3; 6HV4; 6HV5; 6HV7; 6HVA; 6HVR; 6HVS; 6HVT; 6HVU; 6HVV; 6HVW; 6HVX; 6HVY; 6HW0; 6HW3; 6HW4; 6HW5; 6HW6; 6HW7; 6HW8; 6HW9; 6HWA; 6HWB; 6HWC; 6HWD; 6HWE; 6HWF; 6J2C; 6J2N; 6J2Q; 6J2X; 6J30; 6KWY; 6MSB; 6MSD; 6MSE; 6MSG; 6MSH; 6MSJ; 6MSK; 6R70; 6REY; 6RGQ; 6TU3; 6UTF; 6UTG; 6UTH; 6UTI; 6UTJ; 6WJD; 6WJN; 6XMJ; 6ZOU; 6ZP6; 6ZP8; 7AWE; 7B12; 7DR6; 7DR7; 7DRW; 7LS5; 7LS6; 7LSX; 7LXV; 7NAN; 7NAO; 7NAP; 7NAQ; 7NHT; 7O2L; 7PG9; 7QO3; 7QO5; 7QO6; 7QVE; 7QXN; 7QXP; 7QXU; 7QXW; 7QXX; 7QY7; 7QYA; 7QYB; 7TEJ; 7TEO; 7V5G; 7V5M; 7W37; 7W38; 7W39; 7W3A; 7W3B; 7W3C; 7W3F; 7W3G; 7W3H; 7W3I; 7W3J; 7W3K; 7W3M; 8CVR; 8CVS; 8CVT; 8CXB; 8F66; 8F6A; 8F7K; 8FZ5; 8FZ6; 8OLR; 8T08; 8T0M » more |