PROSITE logo

PROSITE entry PS00844


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS00844
Entry name [info] DALA_DALA_LIGASE_2
Accession [info] PS00844
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00659

Name and characterization of the entry

Description [info] D-alanine--D-alanine ligase signature 2.
Pattern [info] 
[LIVAMSFT]-x(3)-[GAHDVSI]-x-[GSAIVCT]-R-[LIVMCAFST]-[DE]-[LIVMFAYGT]-
[LIVMFAR]-x(7,12)-[LIVWCAF]-x-[EK]-[LIVAPMT]-N-[STPA]-x-P-[GA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 557 in 557 different sequences
Number of true positive hits 557 in 557 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 34
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.25 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 557 sequences 

DDLA_BACCR  (Q81D33), DDLA_BRADU  (Q89GA7), DDLA_BRUME  (Q8YHR9),
» more

UniProtKB/Swiss-Prot
False negative sequences		 34 sequences 

DDL_ANAMF   (B9KHS3), DDL_ANAMM   (Q5PBK2), DDL_AZOPC   (B6YQA7),
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

DDL_ANACE   (P35660)


				
	

	

		PDB
[Detailed view]		
		
			57 PDB
			


			1E4E; 1EHI; 1IOV; 1IOW; 2DLN; 2FB9; 2I80; 2I87; 2I8C; 2PVP; 2YZG; 2YZM; 
			
			

			» more