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PROSITE entry PS00801


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PURL: https://purl.expasy.org/prosite/signature/PS00801

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General information about the entry

Entry name [info] TRANSKETOLASE_1
Accession [info] PS00801
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-JUL-1998 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00635

Name and characterization of the entry

Description [info] Transketolase signature 1.
Pattern [info] 
R-x(3)-[LIVMTA]-[DENQSTHKF]-x(5,6)-[GSN]-G-H-[PLIVMF]-[GSTA]-x(2)-
[LIMC]-[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 535 in 535 different sequences
Number of true positive hits 532 in 532 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 78
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 99.44 %
Recall (true positives / (true positives + false negatives)) 87.21 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 532 sequences 

DAS_CANBO   (O93884), DAS_PICAN   (P06834), DXS1_CANSA  (A0A7J6EK66),
» more

UniProtKB/Swiss-Prot
False negative sequences		 78 sequences 

APTA_ACTSZ  (A6VKQ4), APTA_PHOV8  (A6KXB4), DXS1_JANSC  (Q28WA7),
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

TKTC_CRAPL  (Q42676), TKT_POPEU   (P84540)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			3 sequences
			


			
CWLO_BACLD  (Q65NQ9), CWLO_BACSU  (P40767), LRR1_ARATH  (Q9FPJ5)


				
	

	

		PDB
[Detailed view]		
		
			71 PDB
			


			1AY0; 1GPU; 1ITZ; 1NGS; 1QGD; 1TKA; 1TKB; 1TKC; 1TRK; 2O1S; 2R5N; 2R8O; 
			
			

			» more