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PROSITE entry PS00783


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS00783
Entry name [info] RIBOSOMAL_L13
Accession [info] PS00783
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00625

Name and characterization of the entry

Description [info] Ribosomal protein L13 signature.
Pattern [info] 
[LIVM]-[KRVLYFS]-[GKR]-M-[LIV]-[PST]-x(4,5)-[GSKR]-[NQEKRAH]-x(5)-[LIVM]-
x-[AIVL]-[LFYV]-x-[GDNS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 503 in 503 different sequences
Number of true positive hits 501 in 501 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 211
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.60 %
Recall (true positives / (true positives + false negatives)) 70.37 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 501 sequences 

R13A1_ARATH (Q9SFU1), R13A2_ARATH (Q9LRX8), R13A3_ARATH (Q9SVR0),
» more

UniProtKB/Swiss-Prot
False negative sequences		 211 sequences 

R13P3_HUMAN (Q6NVV1), RK13_GUITH  (O46915), RL13_ACIAD  (Q6F898),
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

RL13A_SPIOL (P82454)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			2 sequences
			


			
LUTB_BACLD  (Q65EM0), NOP9_LACTC  (C5DMC1)


				
	

	

		PDB
[Detailed view]		
		
			1399 PDB
			


			1FFK; 1J3A; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1ML5; 
			
			

			» more