Search for
You are here: ExPASy CA  > Databases  > PROSITE

Entry: PS00777

General information about the entry
Entry nameGLYCOSYL_HYDROL_F11_2
Accession numberPS00777
Entry typePATTERN
DateDEC-1992 (CREATED); NOV-1995 (DATA UPDATE); JUL-2010 (INFO UPDATE).
PROSITE DocumentationPDOC00622
Associated ProRulePRU10063
Name and characterization of the entry
DescriptionGlycosyl hydrolases family 11 active site signature 2.
Pattern[LIVMF]-x(2)-E-[AG]-[YWG]-[QRFGS]-[SG]-[STAN]-G-x-[SAF].
Numerical results
  • UniProtKB/Swiss-Prot release number: 09, total number of sequence entries in that release: 519348.
  • Total number of hits in UniProtKB/Swiss-Prot: 52 hits in 51 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 47 hits in 46 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 5 hits in 5 different sequences
  • Number of known missed hits: 7
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 90.38 %
  • Recall (true hits / (true hits + false negatives)): 87.04 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 2
  • `Interesting' site in the pattern: 3,active_site
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
XY11A_PSEXY (P83513), XYN1_COCCA  (Q06562), XYN1_HUMIN  (P55334), 
XYN1_TRIRE  (P36218), XYN2_MAGGR  (P55335), XYN2_TRIRE  (P36217), 
XYN3_ASPKA  (P33557), XYN6_ASPNG  (Q6QJ75), XYNA1_CLOSR (Q8GJ44), 
XYNA2_CLOSR (P33558), XYNA_ASPAW  (P55328), XYNA_ASPCL  (A1CCU0), 
XYNA_ASPFC  (B0XXF3), XYNA_ASPFN  (B8NKE9), XYNA_ASPFU  (Q4WG11), 
XYNA_ASPNG  (P55329), XYNA_ASPOR  (Q9HFA4), XYNA_ASPTN  (Q0CFS3), 
XYNA_ASPTU  (P55331), XYNA_BACCI  (P09850), XYNA_BACPU  (P00694), 
XYNA_BACST  (P45705), XYNA_BACSU  (P18429), XYNA_CLOSA  (P17137), 
XYNA_EMENI  (P55332), XYNA_NEOFI  (A1DJ52), XYNA_NEOPA  (P29127), 
XYNA_PAEVA  (P81536), XYNA_RUMFL  (P29126), XYNA_SCHCO  (P35809), 
XYNA_THELA  (O43097), XYNB_ASPFC  (B0Y8Q8), XYNB_ASPFU  (Q4WLV2), 
XYNB_ASPKA  (P48824), XYNB_ASPNC  (A2Q7I0), XYNB_ASPNG  (P55330), 
XYNB_EMENI  (P55333), XYNB_NEOFI  (A1DNU5), XYNB_STRLI  (P26515), 
XYNC_FIBSS  (P35811), XYNC_STRCO  (Q9RI72), XYNC_STRLI  (P26220), 
XYND_CELFI  (P54865), XYND_RUMFL  (Q53317), XYN_PHACE   (O97402), 
XYN_TRIHA   (P48793)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
XYN4_ASPNG  (Q12550), XYN5_ASPNC  (A2R4D1), XYN5_ASPNG  (Q12549), 
XYNA_PIRSP  (Q12667), XYNB_ASPCL  (A1CU59), XYNB_ASPFN  (B8NJ86), 
XYNB_ASPOR  (P87037)
False positive hits (sequences which do not belong to the set under consideration):
CHI1_RHINI  (P29025), IF2_SYNY3   (P72689), PKHH3_HUMAN (Q7Z736), 
RPOA_RUBXD  (Q1AU56), TETR1_ECOLX (P03038)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1AXK; 1BK1; 1BVV; 1C5H; 1C5I; 1ENX; 1HV0; 1HV1; 1PVX; 1RED; 1REE; 1REF; 1T6G; 1UKR; 1XNB; 1XNC; 1XND; 1XXN; 1XYN; 1XYO; 1XYP; 1YNA; 2B42; 2B45; 2B46; 2BVV; 2C1F; 2DCY; 2DCZ; 2DFB; 2DFC; 2VG9; 3EXU; 3HD8; 3LB9;

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission


If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)

File name:

Format: Swiss-Prot Fasta

or