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PROSITE entry PS00770


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General information about the entry

Entry name [info] AA_TRANSFER_CLASS_4
Accession [info] PS00770
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2001 DATA UPDATE;
27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00618

Name and characterization of the entry

Description [info] Aminotransferases class-IV signature.
Pattern [info] 
E-x-[STAGCI]-x(2)-N-[LIVMFAC]-[FY]-x(6,12)-[LIVMFA]-x-T-x(6,8)-[LIVM]-x-
[GS]-[LIVM]-x-[KR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.


Total number of hits 78 in 78 different sequences
Number of true positive hits 77 in 77 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 11
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 98.72 %
Recall (true positives / (true positives + false negatives)) 87.50 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 77 sequences 

ATNH_EMENI  (Q5AV02), BCA1_SCHPO  (O14370), BCA1_YEAST  (P38891), 

BCA2_YEAST  (P47176), BCAT1_ARATH (Q93Y32), BCAT1_HUMAN (P54687), 
BCAT1_HUMLU (K7QKH1), BCAT1_MOUSE (P24288), BCAT1_RAT   (P54690), 
BCAT1_SHEEP (Q9GKM4), BCAT2_ARATH (Q9M439), BCAT2_BOVIN (Q5EA40), 
BCAT2_HUMAN (O15382), BCAT2_HUMLU (K7QHS5), BCAT2_MOUSE (O35855), 
BCAT2_PONAB (Q5REP0), BCAT2_RAT   (O35854), BCAT3_ARATH (Q9M401), 
BCAT5_ARATH (Q9FYA6), BCAT6_ARATH (Q9LPM9), BCAT7_ARATH (Q9LPM8), 
BCAT_CAEEL  (P54688), BCAT_DICDI  (Q54N47), BCAT_MONBE  (A9UZ24), 
BCAT_NEMVE  (A7SLW1), DAAA_BACLI  (P54692), DAAA_BACSU  (O07597), 
DAAA_BACYM  (P19938), DAAA_LYSSH  (P54693), DAAA_STAAC  (Q5HF24), 
DAAA_STAAM  (P63511), DAAA_STAAN  (P99090), DAAA_STAAR  (Q6GFV1), 
DAAA_STAAS  (Q6G8H7), DAAA_STAAW  (Q8NW24), DAAA_STAEQ  (Q5HNG0), 
DAAA_STAES  (Q8CS41), DAAA_STAHA  (P54694), ILVE1_BACSU (O31461), 
ILVE2_BACSU (P39576), ILVE_AQUAE  (O67733), ILVE_ARCFU  (O29329), 
ILVE_ECO57  (P0AB82), ILVE_ECOL6  (P0AB81), ILVE_ECOLI  (P0AB80), 
ILVE_HAEIN  (P54689), ILVE_HELPJ  (Q9ZJF1), ILVE_HELPY  (O26004), 
ILVE_METJA  (Q58414), ILVE_METTH  (O27481), ILVE_MYCLE  (O32954), 
ILVE_MYCS2  (A0R066), ILVE_MYCTO  (P9WQ74), ILVE_MYCTU  (P9WQ75), 
ILVE_PSEAE  (O86428), ILVE_RICBR  (Q1RIJ2), ILVE_RICCN  (Q92I26), 
ILVE_RICFE  (Q4ULR3), ILVE_RICPR  (O05970), ILVE_RICTY  (Q9AKE5), 
ILVE_SALTI  (P0A1A6), ILVE_SALTY  (P0A1A5), ILVE_STAAC  (Q5HIC1), 
ILVE_STAAM  (P63512), ILVE_STAAN  (P99138), ILVE_STAAR  (Q6GJB4), 
ILVE_STAAS  (Q6GBT3), ILVE_STAAW  (P63513), ILVE_STAEQ  (Q5HRJ8), 
ILVE_STAES  (Q8CQ78), ILVE_STRCO  (O86505), ILVE_SYNY3  (P54691), 
ILVE_THEMA  (P74921), PABC_BACSU  (P28821), PABC_ECOLI  (P28305), 
PABC_VIBCH  (Q9KQI0), PABC_VIBHA  (Q56693)
» more

UniProtKB/Swiss-Prot
False negative sequences		 11 sequences 

BALDT_MYCTU (Q79FW0), BCAL1_ARATH (Q8W0Z7), BCAL2_ARATH (Q9ASR4), 

BCAT4_ARATH (Q9LE06), DAAA_ARATH  (Q8L493), DAAA_LISIN  (Q92B90), 
DAAA_LISM4  (G2JZ74), DAAA_LISMF  (Q71Z49), DAAA_LISMO  (P0DJL9), 
PABC_YEAST  (Q03266), TOXF_COCCA  (Q9Y885)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

BCAT2_PIG   (O19098)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			1 sequence
			


			
YJLD_BACSU  (P80861)


				
	

	

		PDB
[Detailed view]		
		
			67 PDB
			


			1A3G; 1DAA; 1EKF; 1EKP; 1EKV; 1ET0; 1I1K; 1I1L; 1I1M; 1I2K; 1I2L; 1IYD; 
			
				1IYE; 1KT8; 1KTA; 2A1H; 2ABJ; 2COG; 2COI; 2COJ; 2DAA; 2HDK; 2HG8; 2HGW; 
				2HGX; 2HHF; 3CSW; 3DAA; 3DTF; 3DTG; 3HT5; 3JZ6; 3LQS; 4DAA; 5BWR; 5BWT; 
				5BWU; 5BWV; 5BWW; 5BWX; 5CR5; 5HNE; 5I5S; 5I5T; 5I5U; 5I5V; 5I5W; 5I5X; 
				5I5Y; 5I60; 5MPR; 5MQZ; 5MR0; 5U3F; 6NST; 6PRX; 7NTR; 7NWA; 7NWB; 7NWC; 
				7NWE; 7NWM; 7NXN; 7NXO; 7NY2; 7NY9; 7NYA
			
			

			» more