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PROSITE entry PS00731


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PURL: https://purl.expasy.org/prosite/signature/PS00731

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General information about the entry

Entry name [info] AP_NUCLEASE_F2_3
Accession [info] PS00731
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00599

Name and characterization of the entry

Description [info] AP endonucleases family 2 signature 3.
Pattern [info]
[LIVMFW]-H-x-N-[DEG]-[SA]-x(4)-[GNAQ]-x(3)-D-x-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 260 in 260 different sequences
Number of true positive hits 260 in 260 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 18
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 93.53 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] zinc at position 2
Site [info] zinc at position 10
Site [info] zinc at position 12
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
260 sequences

APE_ASFB7   (Q65202), APE_ASFK5   (P0C9C8), APE_ASFM2   (Q65246), 
» more

UniProtKB/Swiss-Prot
False negative sequences
18 sequences

END4_AKKM8  (B2UQE3), END4_BIFLS  (B7GRN1), END4_CAMC5  (A7GW36), 
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

END4_YEREN  (P42691)

		
PDB
[Detailed view]
18 PDB

1QTW; 1QUM; 1XP3; 2NQ9; 2NQH; 2NQJ; 2X7V; 2X7W; 3AAL; 4HNO; 4K1G; 5ZHZ;
» more