PROSITE entry PS00716
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PURL: https://purl.expasy.org/prosite/signature/PS00716
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General information about the entry
| Entry name [info] | SIGMA70_2 |
| Accession [info] | PS00716 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00592 |
Name and characterization of the entry
| Description [info] | Sigma-70 factors family signature 2. |
| Pattern [info] |
[STN]-x(2)-[DENQ]-[LIVMT]-[GAS]-x(4)-[LIVMF]-[PSTG]-x(3)-[LIVMA]-x-[NQR]- [LIVMA]-[EQH]-x(3)-[LIVMFWK]-x(2)-[LIVM]. |
Numerical results [info]
| Total number of hits | 144 in 144 different sequences |
| Number of true positive hits | 144 in 144 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 18 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 88.89 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
144 sequences
FLIA_ECO57 (P0AEM8), FLIA_ECOL6 (P0AEM7), FLIA_ECOLI (P0AEM6),» more
|
| UniProtKB/Swiss-Prot False negative sequences |
18 sequences
FLIA_PSEAE (P29248), RPOF_KITAU (P37970), RPOF_STRCO (P37971),» more |
| PDB [Detailed view] |
217 PDB
1IW7; 1KU3; 1KU7; 1L9U; 1L9Z; 1RIO; 1SMY; 1TLH; 1TTY; 2P7V; 3IYD; 3N97; » more |