PROSITE entry PS00709
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PURL: https://purl.expasy.org/prosite/signature/PS00709
Direct ScanProsite submission
General information about the entry
| Entry name [info] | RIBOSOMAL_L30E_1 |
| Accession [info] | PS00709 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00588 |
Name and characterization of the entry
| Description [info] | Ribosomal protein L30e signature 1. |
| Pattern [info] |
[STA]-x(5)-G-x-[QKRN]-x(2)-[LIVMQ]-[KRQT]-x(2)-[KR]-x-[GS]-x(2)-[KQ]-x- [LIVM](3). |
Numerical results [info]
| Total number of hits | 49 in 49 different sequences |
| Number of true positive hits | 48 in 48 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 1 |
| Number of false negative sequences | 17 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 97.96 % |
| Recall (true positives / (true positives + false negatives)) | 73.85 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
48 sequences
RL301_ARATH (Q9C8F7), RL302_ARATH (Q8VZ19), RL303_ARATH (Q9LSA3),» more
|
| UniProtKB/Swiss-Prot False negative sequences |
17 sequences
RL30E_CALMQ (A8MB78), RL30E_METAC (Q8TRB9), RL30E_METB6 (A7I9N4),» more |
| UniProtKB/Swiss-Prot False positive sequences |
1 sequence
RXL7_BACSU (P46350) |
| PDB [Detailed view] |
437 PDB
1CK2; 1CN7; 1GO0; 1GO1; 1H7M; 1NMU; 1T0K; 1W3E; 1W40; 1W41; 1W42; 1YSH; » more |