PROSITE entry PS00688
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PURL: https://purl.expasy.org/prosite/signature/PS00688
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General information about the entry
Entry name [info] | SIGMA54_INTERACT_3 |
Accession [info] | PS00688 |
Entry type [info] | PATTERN |
Date [info] |
01-JUN-1992 CREATED;
01-JUN-1994 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00579 |
Name and characterization of the entry
Description [info] | Sigma-54 interaction domain C-terminal part signature. |
Pattern [info] |
[FYW]-P-[GS]-N-[LIVM]-R-[EQ]-L-x-[NHAT]. |
Numerical results [info]
Total number of hits | 142 in 142 different sequences |
Number of true positive hits | 142 in 142 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 13 |
Number of 'partial' sequences | 4 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 91.61 % |
Comments [info]
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
142 sequences
ACOR_BACSU (O31551), ACOR_CUPNH (P28614), ALGB_PSEAE (P23747),» more
|
UniProtKB/Swiss-Prot False negative sequences |
13 sequences
DGAR_SALT1 (D0ZLR9), DHAR_CITFR (P45512), DHAR_ECOLI (P76016),» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
4 sequences
NIFA_AZOCH (P56269), NTRC_VIBAL (P19905), YFHA_KLEOX (P21710),» more |
PDB [Detailed view] |
22 PDB
1OJL; 2BJV; 2BJW; 2C96; 2C98; 2C99; 2VII; 4QNM; 4QNR; 4QOS; 5EXP; 5EXS; » more |